RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TATDN2Q93075 761 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 SLC2A11Q9BYW1 496 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 TPSD1Q9BZJ3 242 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 DUSP15Q9H1R2 295 aaPredicted RBP14.76□□□□□ -0.05
TPM1-223ENST00000560445 ABCC13Q9NSE7 274 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 OSER1Q9NX31 292 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 SLC27A6Q9Y2P4 619 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.76□□□□□ -0.05
TPM1-223ENST00000560445 MYOFQ9NZM1 2061 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 EML5Q05BV3 1969 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 BCLAF3A2AJT9 711 aaKnown RBP14.75□□□□□ -0.05
TPM1-223ENST00000560445 SGK1O00141 431 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 KHNYNO15037 678 aaKnown RBP14.75□□□□□ -0.05
TPM1-223ENST00000560445 FBXO21O94952 628 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 CAVIN2O95810 425 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 CORO1AP31146 461 aaKnown RBP14.75□□□□□ -0.05
TPM1-223ENST00000560445 UBE2HP62256 183 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 PDE4CQ08493 712 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 MORC3Q14149 939 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
TPM1-223ENST00000560445 TTI2Q6NXR4 508 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 LCLAT1Q6UWP7 414 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 ENOSF1Q7L5Y1 443 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 CPXM2Q8N436 756 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 HMGB4Q8WW32 186 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 PCDHB4Q9Y5E5 795 aa14.75□□□□□ -0.05
TPM1-223ENST00000560445 SLC12A8A0AV02 714 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 O00370 1275 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 AP5Z1O43299 807 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 MED7O43513 233 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 TIMM44O43615 452 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 GREM1O60565 184 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 PENKP01210 267 aaPredicted RBP14.74□□□□□ -0.05
TPM1-223ENST00000560445 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
TPM1-223ENST00000560445 P2RY2P41231 377 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 MARSP56192 900 aaKnown RBP14.74□□□□□ -0.05
TPM1-223ENST00000560445 ARID5AQ03989 594 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 ADIGQ0VDE8 80 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 LMAN2Q12907 356 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 LRMPQ12912 555 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 CNGA2Q16280 664 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 MEA1Q16626 185 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 DAB2IPQ5VWQ8 1189 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 HSFY1Q96LI6 401 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 DDX50Q9BQ39 737 aaKnown RBP14.74□□□□□ -0.05
TPM1-223ENST00000560445 ULBP1Q9BZM6 244 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 DCHS1Q96JQ0 3298 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 SDK1Q7Z5N4 2213 aa14.74□□□□□ -0.05
TPM1-223ENST00000560445 PLXND1Q9Y4D7 1925 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 TYW5A2RUC4 315 aaKnown RBP14.73□□□□□ -0.05
TPM1-223ENST00000560445 MDM4O15151 490 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 HNRNPLP14866 589 aaKnown RBP eCLIP14.73□□□□□ -0.054e-7■■□□□ 13.3
TPM1-223ENST00000560445 DHPSP49366 369 aaPredicted RBP14.73□□□□□ -0.05
TPM1-223ENST00000560445 PGFP49763 221 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 RNF43Q68DV7 783 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 TMEM92Q6UXU6 159 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 ANKS1BQ7Z6G8 1248 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 UNC45BQ8IWX7 931 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 ERCC4Q92889 916 aaPredicted RBP14.73□□□□□ -0.05
TPM1-223ENST00000560445 CHMP5Q9NZZ3 219 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 NUDT5Q9UKK9 219 aa14.73□□□□□ -0.05
TPM1-223ENST00000560445 MYO18AQ92614 2054 aaKnown RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 PPP1R3GB7ZBB8 358 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 M0QYV0 167 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 ADAM23O75077 832 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 HMBSP08397 361 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 ACADSBP45954 432 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 SNX16P57768 344 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 SF3A2Q15428 464 aaKnown RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 MPPE1Q53F39 396 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 PPM1JQ5JR12 505 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 STPG1Q5TH74 334 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 BSPRYQ5W0U4 402 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 LYSMD4Q5XG99 296 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 NUGGCQ68CJ6 796 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 DENND1CQ8IV53 801 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 CCDC117Q8IWD4 279 aaPredicted RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 TRIM59Q8IWR1 403 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 UBR7Q8N806 425 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 RBBP8NLQ8NC74 664 aaPredicted RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 CEP76Q8TAP6 659 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 WFIKKN2Q8TEU8 576 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 DDI1Q8WTU0 396 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 GABRG3Q99928 467 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 EDEM2Q9BV94 578 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 NUSAP1Q9BXS6 441 aaKnown RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 POLR3BQ9NW08 1133 aaPredicted RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 EVLQ9UI08 416 aaPredicted RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 DACH1Q9UI36 760 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
TPM1-223ENST00000560445 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPM1-223ENST00000560445 THADAQ6YHU6 1953 aa14.72□□□□□ -0.05
TPM1-223ENST00000560445 NCOR2Q9Y618 2525 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 MED19A0JLT2 244 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms