RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 ARMCX3Q9UH62 379 aaPredicted RBP6.88□□□□□ -1.31
IRF9-208ENST00000560311 CPQQ9Y646 472 aa6.88□□□□□ -1.31
IRF9-208ENST00000560311 WNT6Q9Y6F9 365 aa6.88□□□□□ -1.31
IRF9-208ENST00000560311 PTPRDP23468 1912 aa6.88□□□□□ -1.31
IRF9-208ENST00000560311 PRR23AA6NEV1 266 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 LEFTY2O00292 366 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 NCAM2O15394 837 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 BEST1O76090 585 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 ABL1P00519 1130 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 SP9P0CG40 484 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 MBL2P11226 248 aaPredicted RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 NID1P14543 1247 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TCF3P15923 654 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 PFKLP17858 780 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 ABL2P42684 1182 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 PPP3CCP48454 512 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 IFNAR2P48551 515 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 FMO5P49326 533 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TUBP50607 506 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 MLLT6P55198 1093 aaPredicted RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 STX17P56962 302 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 SLC7A9P82251 487 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 FZD5Q13467 585 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CUL2Q13617 745 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 RUNX3Q13761 415 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 PON2Q15165 354 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CAMK4Q16566 473 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 EML3Q32P44 896 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 ZNF394Q53GI3 561 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 ZC3H14Q6PJT7 736 aaKnown RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CRYBG2Q8N1P7 616 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TTC39CQ8N584 583 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TRIML1Q8N9V2 468 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 SCAMP5Q8TAC9 235 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 ATP2A3Q93084 1043 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CHFRQ96EP1 664 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CYP2S1Q96SQ9 504 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 NELL2Q99435 816 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 HNRNPABQ99729 332 aaKnown RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 DNAI2Q9GZS0 605 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CLSTN2Q9H4D0 955 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 METTL14Q9HCE5 456 aaKnown RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 CSNK1G1Q9HCP0 422 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 CISHQ9NSE2 258 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 RBM12Q9NTZ6 932 aaKnown RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 DUS2Q9NX74 493 aaKnown RBP6.87□□□□□ -1.31
IRF9-208ENST00000560311 FBXO4Q9UKT5 387 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 R4GN57 208 aa6.87□□□□□ -1.31
IRF9-208ENST00000560311 FAM92AA1XBS5 289 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 OTOL1A6NHN0 477 aaPredicted RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 C9orf172C9J069 976 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 HHLA1C9JL84 531 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 PROB1E7EW31 1015 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 EFSO43281 561 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 COCHO43405 550 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 NFATC1O95644 943 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 GNA14O95837 355 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 ZDHHC11BP0C7U3 371 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 CHRNB1P11230 501 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 HDCP19113 662 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 CCR3P51677 355 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 RAD23BP54727 409 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 YWHAEP62258 255 aaKnown RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 ZXDBP98169 803 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 SATB1Q01826 763 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 CSTF1Q05048 431 aaKnown RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 LRMPQ12912 555 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 CCINQ13939 588 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 GOLGA7BQ2TAP0 167 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 ZNF528Q3MIS6 628 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 HECTD3Q5T447 861 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 NAIF1Q69YI7 327 aaPredicted RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 TSSK4Q6SA08 328 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 ASCL5Q7RTU5 278 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 FILIP1Q7Z7B0 1213 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
IRF9-208ENST00000560311 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 UBR7Q8N806 425 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 SLC4A11Q8NBS3 891 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 CYFIP2Q96F07 1278 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 TMEM176AQ96HP8 235 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 FAXDC2Q96IV6 333 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 NACA2Q9H009 215 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 FAM124BQ9H5Z6 455 aaPredicted RBP6.86□□□□□ -1.31
IRF9-208ENST00000560311 CCSER2Q9H7U1 834 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 ECT2Q9H8V3 914 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 LMAN1LQ9HAT1 526 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 PNPLA8Q9NP80 782 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 GKN1Q9NS71 199 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 COMMD8Q9NX08 183 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 IL37Q9NZH6 218 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 CFAP97Q9P2B7 532 aa6.86□□□□□ -1.31
IRF9-208ENST00000560311 COQ4Q9Y3A0 265 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms