RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 AMPD2Q01433 879 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 OGDHQ02218 1023 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ITIH3Q06033 890 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TWF1Q12792 350 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TAF10Q12962 218 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 KRT81Q14533 505 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PDK2Q15119 407 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PPP2R5EQ16537 467 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 C15orf59Q2T9L4 293 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 PPM1LQ5SGD2 360 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ERMARDQ5T6L9 678 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 SDHAF4Q5VUM1 108 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CTAGE6Q86UF2 777 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PSTKQ8IV42 348 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 CCDC50Q8IVM0 306 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CTAGE4Q8IX94 777 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 KATNAL2Q8IYT4 538 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ZNF276Q8N554 614 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TTC9BQ8N6N2 239 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 KCTD6Q8NC69 237 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 KREMEN2Q8NCW0 462 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 SLC7A14Q8TBB6 771 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ACTRT1Q8TDG2 376 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 GIPC2Q8TF65 315 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 NDRG1Q92597 394 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 CD101Q93033 1021 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 NT5C3BQ969T7 300 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PGAP3Q96FM1 320 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 TRMT2BQ96GJ1 504 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 PIWIL1Q96J94 861 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 MSLNLQ96KJ4 702 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CAPZA3Q96KX2 299 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 NECTIN4Q96NY8 510 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 SERPINB11Q96P15 392 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 GCNAQ96QF7 691 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PSMB7Q99436 277 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 NPY6RQ99463 290 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TTLL2Q9BWV7 592 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 MAK16Q9BXY0 300 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 NACA2Q9H009 215 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 WDCPQ9H6R7 721 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 FAM204AQ9H8W3 233 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ZWILCHQ9H900 591 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 HOMER3Q9NSC5 361 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 DDIT4Q9NX09 232 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.7□□□□□ -1.34
SPG11-221ENST00000560299 THEGQ9P2T0 379 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PCSK1NQ9UHG2 260 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 SLC12A6Q9UHW9 1150 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 FBXW11Q9UKB1 542 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 TTC7AQ9ULT0 858 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 NAALADL1Q9UQQ1 740 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 YIPF1Q9Y548 306 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 INSL5Q9Y5Q6 135 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PATJQ8NI35 1801 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 MYO7AQ13402 2215 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PLXNA4Q9HCM2 1894 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ZNF638Q14966 1978 aaKnown RBP6.69□□□□□ -1.34
SPG11-221ENST00000560299 A0A1W2PQH9 124 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 LRRD1A4D1F6 860 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 SOBPA7XYQ1 873 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 HIDE1A8MVS5 230 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 MDM4O15151 490 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 SRGAP2O75044 1071 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 XYLBO75191 536 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 SOAT2O75908 522 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 TJP3O95049 919 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 VNN2O95498 520 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 TRUB2O95900 331 aaKnown RBP6.69□□□□□ -1.34
SPG11-221ENST00000560299 FGGP02679 453 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 KRT1P04264 644 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 C8AP07357 584 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 ATF6P18850 670 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 CDC25CP30307 473 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 CCR1P32246 355 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 GJC1P36383 396 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 ATP5C1P36542 298 aaKnown RBP6.69□□□□□ -1.34
SPG11-221ENST00000560299 LTBRP36941 435 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 ARL4AP40617 200 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 CLCN4P51793 760 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 ZNF252P-AS1Q0IIN9 211 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 HYAL1Q12794 435 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 NME3Q13232 169 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 TFDP2Q14188 446 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 LONRF2Q1L5Z9 754 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 TFDP3Q5H9I0 405 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 TCEAL5Q5H9L2 206 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 EFHC2Q5JST6 749 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 BRMS1LQ5PSV4 323 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 HECTD3Q5T447 861 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 SYPL2Q5VXT5 272 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 HFE2Q6ZVN8 426 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 SPRED2Q7Z698 418 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 DNAJB7Q7Z6W7 309 aaPredicted RBP6.69□□□□□ -1.34
SPG11-221ENST00000560299 VSIG1Q86XK7 387 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 CREG2Q8IUH2 290 aa6.69□□□□□ -1.34
SPG11-221ENST00000560299 RASGEF1CQ8N431 466 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms