RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 BRD3Q15059 726 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 SAFBQ15424 915 aaKnown RBP eCLIP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ELF2Q15723 593 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 C3orf36Q3SXR2 165 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 TTC31Q49AM3 519 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 KLHL22Q53GT1 634 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 HSP90AB3PQ58FF7 597 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ZNF618Q5T7W0 954 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ATL3Q6DD88 541 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 SLC18B1Q6NT16 456 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 MMS22LQ6ZRQ5 1243 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 SLC29A4Q7RTT9 530 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 WDR53Q7Z5U6 358 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 TECPR1Q7Z6L1 1165 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 EFCAB13Q8IY85 973 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 PRR18Q8N4B5 295 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 FANCBQ8NB91 859 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 CCDC150Q8NCX0 1101 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 PSD4Q8NDX1 1056 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 PLBD2Q8NHP8 589 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 RGMAQ96B86 450 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 TTC14Q96N46 770 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 DMRTA2Q96SC8 542 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 VRK1Q99986 396 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 CNPPD1Q9BV87 410 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 NUP62CLQ9H1M0 184 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ALDH8A1Q9H2A2 487 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 CLSTN2Q9H4D0 955 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 BRD9Q9H8M2 597 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 GPR35Q9HC97 309 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 PRDM11Q9NQV5 511 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 GNL3LQ9NVN8 582 aaKnown RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 TUBA8Q9NY65 449 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 GOLGA6AQ9NYA3 693 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ORC3Q9UBD5 711 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 SH2B3Q9UQQ2 575 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 RRP15Q9Y3B9 282 aaKnown RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 LRRFIP2Q9Y608 721 aaKnown RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 RPGRIP1LQ68CZ1 1315 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 ATXN2Q99700 1313 aaKnown RBP4.12□□□□□ -1.75
AP3S2-210ENST00000559601 MSH6P52701 1360 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 CDC42BPBQ9Y5S2 1711 aa4.12□□□□□ -1.75
AP3S2-210ENST00000559601 TUBGCP6Q96RT7 1819 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 FNDC1Q4ZHG4 1894 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ARAP3Q8WWN8 1544 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 DEPDC5O75140 1603 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ZCCHC11Q5TAX3 1644 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 TET3O43151 1660 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 A0A087WUV0 522 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 GOLGA6L9A6NEM1 432 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ERICH4A6NGS2 130 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CCDC154A6NI56 674 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 TMCO5BA8MYB1 307 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 INSIG1O15503 277 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 NBNO60934 754 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 RPLP2P05387 115 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SKILP12757 684 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ITGALP20701 1170 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SYT1P21579 422 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SMARCA1P28370 1054 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 PHKA1P46020 1223 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ZNF135P52742 658 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 PDE1AP54750 535 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CCZ1BP86790 482 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CCZ1P86791 482 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 KIF23Q02241 960 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 HLTFQ14527 1009 aaKnown RBP eCLIP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SMC1AQ14683 1233 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 IQCB1Q15051 598 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ZRSR1Q15695 479 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 KHDC1Q4VXA5 237 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 RBM20Q5T481 1227 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 EFCAB2Q5VUJ9 269 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 AWAT2Q6E213 333 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 TAF2Q6P1X5 1199 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 LEKR1Q6ZMV7 388 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 KRBA2Q6ZNG9 492 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 GALNT16Q8N428 558 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CCDC191Q8NCU4 936 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 COA7Q96BR5 231 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 FAM136AQ96C01 138 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 HMCESQ96FZ2 354 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 MPHOSPH8Q99549 860 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 BPIFA3Q9BQP9 254 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 TRIM5Q9C035 493 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 ZSCAN16Q9H4T2 348 aaPredicted RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 SAGE1Q9NXZ1 904 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 CLIP2Q9UDT6 1046 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 MTMR6Q9Y217 621 aa4.11□□□□□ -1.75
AP3S2-210ENST00000559601 RRP7AQ9Y3A4 280 aaKnown RBP4.11□□□□□ -1.75
AP3S2-210ENST00000559601 TTC21AQ8NDW8 1320 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms