RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 NRDE2Q9H7Z3 1164 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 STX18Q9P2W9 335 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 KIAA1257Q9ULG3 409 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 HBS1LQ9Y450 684 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 GABBR2O75899 941 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 KITP10721 976 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 ARF4P18085 180 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 AMPD1P23109 780 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 CYP2F1P24903 491 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 GRIA1P42261 906 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 CCNHP51946 323 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 RAP1GDS1P52306 607 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 AQP5P55064 265 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 THOC5Q13769 683 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 NDUFAF2Q8N183 169 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 CCDC33Q8N5R6 958 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 WWP1Q9H0M0 922 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 DPP3Q9NY33 737 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 BPGMP07738 259 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 CRHR1P34998 444 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 PSEN1P49768 467 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 RBP5P82980 135 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SLC6A3Q01959 620 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 RBM15BQ8NDT2 890 aaKnown RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SLC16A10Q8TF71 515 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SCG3Q8WXD2 468 aaKnown RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 STMN2Q93045 179 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 PPP2R3BQ9Y5P8 575 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 PAPSS1O43252 624 aaPredicted RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 MAGEC1O60732 1142 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 GCATO75600 419 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 STAU1O95793 577 aaKnown RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 TPSB2P20231 275 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 KLC1Q07866 573 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 TPSAB1Q15661 275 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
SPG11-215ENST00000559193 TMPRSS6Q8IU80 811 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SCUBE3Q8IX30 993 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 RAB3IL1Q8TBN0 382 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 SLC4A5Q9BY07 1137 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 MAGEB5Q9BZ81 275 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 PLA2G4CQ9UP65 541 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 WASF2Q9Y6W5 498 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 EVPLQ92817 2033 aa17.16■□□□□ 0.34
SPG11-215ENST00000559193 KAT6AQ92794 2004 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 CCDC189A1A4V9 331 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 CDK18Q07002 472 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 GRIK3Q13003 919 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ZCCHC23Q6ZST2 131 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ADGRF2Q8IZF7 708 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ARHGAP24Q8N264 748 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 STKLD1Q8NE28 680 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 MPHOSPH6Q99547 160 aaKnown RBP17.15■□□□□ 0.34
SPG11-215ENST00000559193 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 MRPL45Q9BRJ2 306 aaKnown RBP17.15■□□□□ 0.34
SPG11-215ENST00000559193 B3GNT5Q9BYG0 378 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 FAM49BQ9NUQ9 324 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 NME7Q9Y5B8 376 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ZSWIM8A7E2V4 1837 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 A8MXQ7 604 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 INSRRP14616 1297 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 L1CAMP32004 1257 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ATXN1P54253 815 aaKnown RBP17.15■□□□□ 0.34
SPG11-215ENST00000559193 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 RCN2Q14257 317 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 RFX8Q6ZV50 586 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 TMEM110Q86TL2 294 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 IFNLR1Q8IU57 520 aaPredicted RBP17.15■□□□□ 0.34
SPG11-215ENST00000559193 CRLF3Q8IUI8 442 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 LINC01465Q8N7H1 131 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 UCMAQ8WVF2 138 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 CCDC106Q9BWC9 280 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 PDGFCQ9NRA1 345 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 LRCH1Q9Y2L9 728 aa17.15■□□□□ 0.34
SPG11-215ENST00000559193 BIRC5O15392 142 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 VTNP04004 478 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 TXNP10599 105 aaKnown RBP17.14■□□□□ 0.33
SPG11-215ENST00000559193 SERPINB9P50453 376 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 AP1B1Q10567 949 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 STILQ15468 1287 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 C4orf22Q6V702 233 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 SESTD1Q86VW0 696 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 UNC5BQ8IZJ1 945 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 QKIQ96PU8 341 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPG11-215ENST00000559193 MOCS1Q9NZB8 636 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 HESX1Q9UBX0 185 aa17.14■□□□□ 0.33
SPG11-215ENST00000559193 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms