RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CNPY2Q9Y2B0 182 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 MAP3K2Q9Y2U5 619 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 FPGT-TNNI3KV9GXZ4 949 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 A1L4Q6 167 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CCDC78A2IDD5 438 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PI4KAP2A4QPH2 592 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SLC38A8A6NNN8 435 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 ADM5C9JUS6 153 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CCER2I3L3R5 266 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 M0QYT0 321 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TNPO2O14787 897 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 KIAA0355O15063 1070 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PPM1DO15297 605 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CYP27B1O15528 508 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 GUCY1B2O75343 617 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 DDX58O95786 925 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 CNPP09543 421 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 PEPDP12955 493 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 RRM1P23921 792 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CXCR5P32302 372 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 GRK5P34947 590 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CNR2P34972 360 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PSMC2P35998 433 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 PCP4P48539 62 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 MAN2A2P49641 1150 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PDE1AP54750 535 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 EPHB4P54760 987 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CXADRP78310 365 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 MPP3Q13368 585 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CLCA4Q14CN2 919 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SEC23BQ15437 767 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 ST3GAL2Q16842 350 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 NBPF8Q3BBV2 869 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 RUNDC3AQ59EK9 446 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 WDR45BQ5MNZ6 344 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SPATA31A3Q5VYP0 1347 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SLC9A4Q6AI14 798 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CCDC144NLQ6NUI1 221 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TCTN3Q6NUS6 607 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 MSANTD2Q6P1R3 559 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 GLB1LQ6UWU2 654 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 BBS12Q6ZW61 710 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 NEK10Q6ZWH5 1172 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 GDF7Q7Z4P5 450 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 POLNQ7Z5Q5 900 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 RAB11FIP4Q86YS3 637 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 ZNF808Q8N4W9 903 aaPredicted RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 METTL25Q8N6Q8 603 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TP53I13Q8NBR0 393 aaPredicted RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 SYT8Q8NBV8 401 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SUPT20HQ8NEM7 779 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TOR1AIP2Q8NFQ8 470 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SUN3Q8TAQ9 357 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 KCNG4Q8TDN1 519 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TBC1D22AQ8WUA7 517 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SLC22A17Q8WUG5 538 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SNRNP27Q8WVK2 155 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 GLG1Q92896 1179 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 KTI12Q96EK9 354 aaPredicted RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 TEX101Q9BY14 249 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 ALOXE3Q9BYJ1 711 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 AGXT2Q9BYV1 514 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 CLPBQ9H078 707 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SLC25A18Q9H1K4 315 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 MEGF9Q9H1U4 602 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 STN1Q9H668 368 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 EIF2B3Q9NR50 452 aaKnown RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 DIAPH3Q9NSV4 1193 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 INTS13Q9NVM9 706 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 ALKBH4Q9NXW9 302 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 VPS28Q9UK41 221 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 TRPC5Q9UL62 973 aaPredicted RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 GPR34Q9UPC5 381 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 SSX2IPQ9Y2D8 614 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 UBE2J1Q9Y385 318 aaPredicted RBP2.55□□□□□ -2
GABPB1-209ENST00000559100 TTLL3Q9Y4R7 772 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PCDHB2Q9Y5E7 798 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 PCDHA10Q9Y5I2 948 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.55□□□□□ -2
GABPB1-209ENST00000559100 CYP46A1Q9Y6A2 500 aa2.55□□□□□ -2
GABPB1-209ENST00000559100 LMTK3Q96Q04 1460 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 A0A1W2PS29 197 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 SAC3D1A6NKF1 404 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 GRXCR1A8MXD5 290 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 DIRC3C9JPN6 131 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 F5H0A9 414 aaPredicted RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 ZNF213O14771 459 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CTIFO43310 598 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 HNRNPRO43390 633 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 USO1O60763 962 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 TMCC2O75069 709 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 NCR1O76036 304 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TSPAN15O95858 294 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 FESP07332 822 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ALADP13716 330 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TNNT1P13805 278 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CREB1P16220 341 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 MMP8P22894 467 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 RPS6KB1P23443 525 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms