RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SFTPA1Q8IWL2 248 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 CCDC33Q8N5R6 958 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 FAM160A2Q8N612 972 aaPredicted RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 ALLCQ8N6M5 410 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 STK32AQ8WU08 396 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 ZC3H10Q96K80 434 aaKnown RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 FBXO10Q9UK96 956 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 PRR5-ARHGAP8B1AHC4 643 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 GABBR2O75899 941 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 KLF8O95600 359 aaPredicted RBP18.41■□□□□ 0.54
SMAD3-210ENST00000559092 PENKP01210 267 aaPredicted RBP18.41■□□□□ 0.54
SMAD3-210ENST00000559092 HMBSP08397 361 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 LCP1P13796 627 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 SDHBP21912 280 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 GPD2P43304 727 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 HARS2P49590 506 aaKnown RBP18.41■□□□□ 0.54
SMAD3-210ENST00000559092 ARHGAP8P85298 464 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 LMNB2Q03252 620 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 EMC10Q5UCC4 262 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 FMNL3Q8IVF7 1028 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 CPXM2Q8N436 756 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 TXNDC5Q8NBS9 432 aaKnown RBP18.41■□□□□ 0.54
SMAD3-210ENST00000559092 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 POLMQ9NP87 494 aaPredicted RBP18.41■□□□□ 0.54
SMAD3-210ENST00000559092 APEX2Q9UBZ4 518 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 SPTBN4Q9H254 2564 aa18.41■□□□□ 0.54
SMAD3-210ENST00000559092 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
SMAD3-210ENST00000559092 CISD3P0C7P0 127 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 SLC9A1P19634 815 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 ACADSBP45954 432 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 RGS7P49802 495 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 USP39Q53GS9 565 aaKnown RBP18.4■□□□□ 0.54
SMAD3-210ENST00000559092 C10orf76Q5T2E6 689 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 MSANTD2Q6P1R3 559 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 DENND1CQ8IV53 801 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 FAM217AQ8IXS0 508 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 ZNF513Q8N8E2 541 aaPredicted RBP18.4■□□□□ 0.54
SMAD3-210ENST00000559092 EDEM1Q92611 657 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 GOLGA1Q92805 767 aa18.4■□□□□ 0.54
SMAD3-210ENST00000559092 ANTXRLA6NF34 631 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 SGK1O00141 431 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 TRIM24O15164 1050 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 ADAM23O75077 832 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 LATS1O95835 1130 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 CYBBP04839 570 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 PON1P27169 355 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 DGKGP49619 791 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 ZNF445P59923 1031 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 SPEM2Q0P670 501 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 CSRP2Q16527 193 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 FYB2Q5VWT5 728 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 TMEM92Q6UXU6 159 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 KBTBD6Q86V97 674 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 ZNF606Q8WXB4 792 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 SHC3Q92529 594 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 PARD6AQ9NPB6 346 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 STOML2Q9UJZ1 356 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 SLC27A6Q9Y2P4 619 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 PCDHGA5Q9Y5G8 931 aa18.39■□□□□ 0.53
SMAD3-210ENST00000559092 RHOBTB1O94844 696 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
SMAD3-210ENST00000559092 CALCAP01258 141 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 LTFP02788 710 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 GNA15P30679 374 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 NTSR1P30989 418 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 E2F5Q15329 346 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 ELF2Q15723 593 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 PLK5Q496M5 336 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 VWA3BQ502W6 1294 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 SDE2Q6IQ49 451 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 ANO7Q6IWH7 933 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 BEND5Q7L4P6 421 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 RMDN1Q96DB5 314 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 TUBGCP2Q9BSJ2 902 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 SLC4A5Q9BY07 1137 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 SLC2A11Q9BYW1 496 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 IRX2Q9BZI1 471 aaPredicted RBP18.38■□□□□ 0.53
SMAD3-210ENST00000559092 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 SEMA4GQ9NTN9 838 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 DLL3Q9NYJ7 618 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 SFMBT1Q9UHJ3 866 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 USP18Q9UMW8 372 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
SMAD3-210ENST00000559092 GFRA2O00451 464 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 NPC1O15118 1278 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 EPN2O95208 641 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 HNRNPLP14866 589 aaKnown RBP eCLIP18.37■□□□□ 0.536e-9■■□□□ 12.3
SMAD3-210ENST00000559092 FOXK2Q01167 660 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 RING1Q06587 406 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 BYSLQ13895 437 aaKnown RBP18.37■□□□□ 0.53
SMAD3-210ENST00000559092 PUM1Q14671 1186 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMAD3-210ENST00000559092 ADGRF1Q5T601 910 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 DENND1BQ6P3S1 775 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 ERMP1Q7Z2K6 904 aa18.37■□□□□ 0.53
SMAD3-210ENST00000559092 TMEM110Q86TL2 294 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms