RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 AGO1Q9UL18 857 aaKnown RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 KIAA1257Q9ULG3 409 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 PRRT4C9JH25 899 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 THAP12O43422 761 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 ADAM23O75077 832 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 RETP07949 1114 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 BCKDHBP21953 392 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 HOXA6P31267 233 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 CNR2P34972 360 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 TNFRSF4P43489 277 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 DAOAP59103 153 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 MRPS21P82921 87 aaKnown RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 COG7P83436 770 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 SF3A2Q15428 464 aaKnown RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 CRY1Q16526 586 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 KLHDC10Q6PID8 442 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 FOXR2Q6PJQ5 311 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 CACNA2D4Q7Z3S7 1137 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 CAMKK1Q8N5S9 505 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 ZNF513Q8N8E2 541 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 KIAA1958Q8N8K9 716 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 SLC35F5Q8WV83 523 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 XPO6Q96QU8 1125 aaKnown RBP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMAD3-208ENST00000558827 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 RAD54BQ9Y620 910 aa13.1□□□□□ -0.31
SMAD3-208ENST00000558827 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 GDF9O60383 454 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 CISD3P0C7P0 127 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 EIF2DP41214 584 aaKnown RBP13.09□□□□□ -0.31
SMAD3-208ENST00000558827 DGKGP49619 791 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 ZNF132P52740 706 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 GCNT1Q02742 428 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 PLK5Q496M5 336 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 PASD1Q8IV76 773 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 DUSP15Q9H1R2 295 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-208ENST00000558827 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 FAM124BQ9H5Z6 455 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-208ENST00000558827 SAMSN1Q9NSI8 373 aaKnown RBP13.09□□□□□ -0.31
SMAD3-208ENST00000558827 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 THADAQ6YHU6 1953 aa13.09□□□□□ -0.31
SMAD3-208ENST00000558827 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 BECN2A8MW95 431 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CACNG3O60359 315 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-208ENST00000558827 PON1P27169 355 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 GNA15P30679 374 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 MFAP3P55082 362 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 EOGTQ5NDL2 527 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 DDI1Q8WTU0 396 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 SORCS1Q8WY21 1168 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 FAM149B1Q96BN6 582 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
SMAD3-208ENST00000558827 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 CYTH4Q9UIA0 394 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 NAALADL1Q9UQQ1 740 aa13.08□□□□□ -0.32
SMAD3-208ENST00000558827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-208ENST00000558827 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 LTFP02788 710 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 HOXB2P14652 356 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 KCNA4P22459 653 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 GPD2P43304 727 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 SGSHP51688 502 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 CREB5Q02930 508 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 TRIP4Q15650 581 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-208ENST00000558827 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
SMAD3-208ENST00000558827 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms