RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TPSD1Q9BZJ3 242 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 DUS2Q9NX74 493 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 EBF1Q9UH73 591 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 L1RE1Q9UN81 338 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 STYXL1Q9Y6J8 313 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 ATMQ13315 3056 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 A0A0A0MRY4 1105 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 TRAV19A0A0A6YYK7 116 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ANTXRLA6NF34 631 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 C4orf47A7E2U8 309 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 HCRTO43612 131 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 DEAF1O75398 565 aaPredicted RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 RHOBTB1O94844 696 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 IL18RAPO95256 599 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 CAVIN2O95810 425 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 PRB1P04280 392 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ITGB3P05106 788 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ESRRAP11474 423 aaPredicted RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 BCKDHBP21953 392 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ADSSP30520 456 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 GBP1P32455 592 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ABCD1P33897 745 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 UBA7P41226 1012 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 IFNAR2P48551 515 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 DGKEP52429 567 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 SETDB1Q15047 1291 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 COL28A1Q2UY09 1125 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 PMS2CLQ68D20 193 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 SLFN12LQ6IEE8 588 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 KIAA1211LQ6NV74 962 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 OSTM1Q86WC4 334 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 SFR1Q86XK3 245 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ZSWIM2Q8NEG5 633 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 TSTD1Q8NFU3 115 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 POMGNT1Q8WZA1 660 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 LARP4BQ92615 738 aaKnown RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 MYRFLQ96LU7 910 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 CYP2S1Q96SQ9 504 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ST6GALNAC4Q9H4F1 302 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 TMEM206Q9H813 350 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 DDX43Q9NXZ2 648 aaKnown RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 INVSQ9Y283 1065 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 APC2O95996 2303 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 ACACAQ13085 2346 aa10.34□□□□□ -0.75
SPG11-212ENST00000558790 TEP1Q99973 2627 aaKnown RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 TP53BP1Q12888 1972 aaPredicted RBP10.34□□□□□ -0.75
SPG11-212ENST00000558790 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 PATE3B3GLJ2 98 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 H3BQV1 296 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 DDIT3P35638 169 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 PNPLA4P41247 253 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
SPG11-212ENST00000558790 TFAMQ00059 246 aaKnown RBP10.33□□□□□ -0.76
SPG11-212ENST00000558790 ANO7Q6IWH7 933 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 NT5DC4Q86YG4 428 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 ARL14EPQ8N8R7 260 aaPredicted RBP10.33□□□□□ -0.76
SPG11-212ENST00000558790 GALNT11Q8NCW6 608 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 MDGA1Q8NFP4 955 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 CXorf38Q8TB03 319 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 SH3RF2Q8TEC5 729 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 EXOC4Q96A65 974 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 SAAL1Q96ER3 474 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 ACBD6Q9BR61 282 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 GCNT4Q9P109 453 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
SPG11-212ENST00000558790 HUS1O60921 280 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 CAPNS1P04632 268 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 GJB2P29033 226 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 OPRD1P41143 372 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 MYL7Q01449 175 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 POU5F1Q01860 360 aaKnown RBP10.32□□□□□ -0.76
SPG11-212ENST00000558790 KCNB1Q14721 858 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 TSNAXIP1Q2TAA8 658 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 GAB4Q2WGN9 574 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 CFAP221Q4G0U5 840 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 C2orf27AQ580R0 203 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 LARP1BQ659C4 914 aaKnown RBP10.32□□□□□ -0.76
SPG11-212ENST00000558790 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 ZNF720Q7Z2F6 126 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 SFTPA1Q8IWL2 248 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 SCN4BQ8IWT1 228 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 ADGRF2Q8IZF7 708 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 TMEM86AQ8N2M4 240 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 USP33Q8TEY7 942 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 HVCN1Q96D96 273 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
SPG11-212ENST00000558790 CRELD1Q96HD1 420 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
SPG11-212ENST00000558790 MTMR12Q9C0I1 747 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 TMEM9BQ9NQ34 198 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 CACNA2D2Q9NY47 1150 aa10.32□□□□□ -0.76
SPG11-212ENST00000558790 RBAKQ9NYW8 714 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms