RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787		A8MXQ7	604 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	LEFTY2	O00292	366 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	DCLK1	O15075	740 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	DYRK3	O43781	588 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	TACC1	O75410	805 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	PAPSS2	O95340	614 aa	Predicted RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	VNN1	O95497	513 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	C4BPA	P04003	597 aa	Known RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	RET	P07949	1114 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SLFN14	P0C7P3	912 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	PFKFB1	P16118	471 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	ANXA13	P27216	316 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	MESP2	Q0VG99	397 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	PSMD2	Q13200	908 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	KCNB1	Q14721	858 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	MAPRE1	Q15691	268 aa	Known RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	C2orf27A	Q580R0	203 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	VSTM1	Q6UX27	236 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	PAQR9	Q6ZVX9	377 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	FILIP1	Q7Z7B0	1213 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	KBTBD6	Q86V97	674 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	WDR5B	Q86VZ2	330 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SFTPA1	Q8IWL2	248 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SYNPO	Q8N3V7	929 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	CPA6	Q8N4T0	437 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	FSIP1	Q8NA03	581 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	B3GALNT2	Q8NCR0	500 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	KIAA0895	Q8NCT3	520 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	RPLP0P6	Q8NHW5	317 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SCAMP5	Q8TAC9	235 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	PARD3B	Q8TEW8	1205 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	MED10	Q9BTT4	135 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SMOC1	Q9H4F8	434 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	MAGEF1	Q9HAY2	307 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SEMA4G	Q9NTN9	838 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	DMAC2	Q9NW81	257 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	TRPM5	Q9NZQ8	1165 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	CFAP45	Q9UL16	551 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	SLC8A2	Q9UPR5	921 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	MAPK8IP1	Q9UQF2	711 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	INVS	Q9Y283	1065 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	TPR	P12270	2363 aa	Known RBP	7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	UBE4B	O95155	1302 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	EPG5	Q9HCE0	2579 aa		7.43	□□□□□ -1.22
MARK3-215	ENST00000558787	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	RPP40	O75818	363 aa	Known RBP	7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CCDC130	P13994	396 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	DRD1	P21728	446 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	HOXA6	P31267	233 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	OPRD1	P41143	372 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	SLC6A11	P48066	632 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	PGF	P49763	221 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	NDUFA8	P51970	172 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	SNRPF	P62306	86 aa	Known RBP	7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	KRT85	P78386	507 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	LMNB2	Q03252	620 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	SF3A2	Q15428	464 aa	Known RBP	7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	GAB4	Q2WGN9	574 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ZNF699	Q32M78	642 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	C1orf220	Q5T0J3	134 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	SPOPL	Q6IQ16	392 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CLEC17A	Q6ZS10	378 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ACOT1	Q86TX2	421 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	C12orf56	Q8IXR9	622 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CCDC33	Q8N5R6	958 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	GAB3	Q8WWW8	586 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CD101	Q93033	1021 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ATP2A3	Q93084	1043 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	WBP2	Q969T9	261 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	C8orf48	Q96LL4	319 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	GBP4	Q96PP9	640 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	TTLL2	Q9BWV7	592 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ARRDC1-AS1	Q9H2J1	176 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	KCTD10	Q9H3F6	313 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ZDHHC4	Q9NPG8	344 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	RXFP3	Q9NSD7	469 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	EXOC1	Q9NV70	894 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CFAP97	Q9P2B7	532 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	HMGXB4	Q9UGU5	601 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	NAGPA	Q9UK23	515 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ARHGAP26	Q9UNA1	814 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CPQ	Q9Y646	472 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	CNOT1	A5YKK6	2376 aa	Known RBP	7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ACACB	O00763	2458 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	ANAPC1	Q9H1A4	1944 aa		7.42	□□□□□ -1.22
MARK3-215	ENST00000558787	GREB1	Q4ZG55	1949 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	SCO2	A0A1W2PP80	73 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	PRR5-ARHGAP8	B1AHC4	643 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	GOLGA6L22	H0YM25	854 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787		K7EQS6	105 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	COCH	O43405	550 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	ATG13	O75143	517 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	BEST1	O76090	585 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	OAS1	P00973	400 aa	Known RBP	7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	NR3C1	P04150	777 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	RPN1	P04843	607 aa	Known RBP	7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	CYP17A1	P05093	508 aa		7.41	□□□□□ -1.22
MARK3-215	ENST00000558787	FAM163B	P0C2L3	166 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms