RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FBXO32Q969P5 355 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
SMAD3-206ENST00000558739 MTMR12Q9C0I1 747 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 THAP10Q9P2Z0 257 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-206ENST00000558739 K7ENP7 123 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 WNT9AO14904 365 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 SYNCRIPO60506 623 aaKnown RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 KRT38O76015 456 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 SEMA4FO95754 770 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 CD27P26842 260 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 EPHA8P29322 1005 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 MFAP3P55082 362 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ST3GAL1Q11201 340 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ORC1Q13415 861 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ZNF234Q14588 700 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ME3Q16798 604 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 CSGALNACT2Q8N6G5 542 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 LRRC52Q8N7C0 313 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 VCPIP1Q96JH7 1222 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ZNF578Q96N58 590 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 DPEP3Q9H4B8 488 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 EBF2Q9HAK2 575 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 LARSQ9P2J5 1176 aaKnown RBP12.57□□□□□ -0.4
SMAD3-206ENST00000558739 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 CLEC4EQ9ULY5 219 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 OTOGQ6ZRI0 2925 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 NF1P21359 2839 aa12.57□□□□□ -0.4
SMAD3-206ENST00000558739 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 A0A1W2PNU3 283 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 PMS2P1A4D2B8 440 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 H0YCG3 227 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 MT-CO3P00414 261 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 EPHX1P07099 455 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 CDK4P11802 303 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 YWHAQP27348 245 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 CDH8P55286 799 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 C21orf59P57076 290 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 BNIP3Q12983 259 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 ORC2Q13416 577 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 MRPL45Q9BRJ2 306 aaKnown RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 ACE2Q9BYF1 805 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 LHX5Q9H2C1 402 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 CAAP1Q9H8G2 361 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 COL27A1Q8IZC6 1860 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-206ENST00000558739 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
SMAD3-206ENST00000558739 MDM4O15151 490 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 VILLO15195 856 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-206ENST00000558739 KCNA1Q09470 495 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 TRIM29Q14134 588 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 LINC00303Q3SY05 128 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 KANSL1Q7Z3B3 1105 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 WDR35Q9P2L0 1181 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
SMAD3-206ENST00000558739 MTORP42345 2549 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 TDRD6O60522 2096 aaKnown RBP12.54□□□□□ -0.4
SMAD3-206ENST00000558739 SUV39H1O43463 412 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 TLR5O60602 858 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 USP12O75317 370 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 IL18RAPO95256 599 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ZDHHC11BP0C7U3 371 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ITGB6P18564 788 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 CR2P20023 1033 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 ZNF131P52739 623 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 SLC5A3P53794 718 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 GTF2BQ00403 316 aa12.54□□□□□ -0.4
SMAD3-206ENST00000558739 UBAP2LQ14157 1087 aaKnown RBP12.54□□□□□ -0.4
SMAD3-206ENST00000558739 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
SMAD3-206ENST00000558739 C4orf17Q53FE4 359 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms