RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 CDH8P55286 799 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 C21orf59P57076 290 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 IRX6P78412 446 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ENPP2Q13822 863 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 MDH1BQ5I0G3 518 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 KDM7AQ6ZMT4 941 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 HTR3DQ70Z44 454 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 KCNE4Q8WWG9 221 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ELF4Q99607 663 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 NACA2Q9H009 215 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 TMEM30AQ9NV96 361 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 PLK2Q9NYY3 685 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 STYXL1Q9Y6J8 313 aa15.18■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ARID1BQ8NFD5 2236 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 TERTO14746 1132 aaKnown RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 NPC1O15118 1278 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 GREM1O60565 184 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 TSPAN3O60637 253 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ACO1P21399 889 aaKnown RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 RBP5P82980 135 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 GTF2BQ00403 316 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 INSM1Q01101 510 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ILKQ13418 452 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SHBQ15464 509 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 C6orf132Q5T0Z8 1188 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ZNF574Q6ZN55 896 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 DPH6Q7L8W6 267 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 NUP93Q8N1F7 819 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SAP25Q8TEE9 199 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 RFFLQ8WZ73 363 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 OVCA2Q8WZ82 227 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 GTF3C6Q969F1 213 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 IKZF4Q9H2S9 585 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 PARVGQ9HBI0 331 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 LRRK2Q5S007 2527 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 UTP20O75691 2785 aaKnown RBP15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 NOTCH2Q04721 2471 aa15.17■□□□□ 0.02
TRAPPC6B-207ENST00000557764 VILLO15195 856 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 FAM13AO94988 1023 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 RTN3O95197 1032 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SEMA4FO95754 770 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 GP1BBP13224 206 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ME3Q16798 604 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 GEN1Q17RS7 908 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 HYIQ5T013 277 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SNX30Q5VWJ9 437 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 LIMS2Q7Z4I7 341 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ORAI3Q9BRQ5 295 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 FAM213AQ9BRX8 229 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 FOXP1Q9H334 677 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 PCDHB1Q9Y5F3 818 aa15.16■□□□□ 0.02
TRAPPC6B-207ENST00000557764 MPOP05164 745 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 EPHX1P07099 455 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 CKMT2P17540 419 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 WARSP23381 471 aaKnown RBP15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 PRKCHP24723 683 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 TRAPPC10P48553 1259 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 TUBP50607 506 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ZNF131P52739 623 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 BCAT1P54687 386 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ZNF234Q14588 700 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 SCAMP5Q8TAC9 235 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 UCMAQ8WVF2 138 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ZNF518BQ9C0D4 1074 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 BTBD1Q9H0C5 482 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 ZHX3Q9H4I2 956 aa15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 NOL7Q9UMY1 257 aaKnown RBP15.15■□□□□ 0.02
TRAPPC6B-207ENST00000557764 CLDN5O00501 218 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 MT-CO3P00414 261 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 ABCD1P33897 745 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 MFAP3P55082 362 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 RACK1P63244 317 aaKnown RBP15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 NFKB2Q00653 900 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 ATG14Q6ZNE5 492 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 KCTD17Q8N5Z5 321 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 ZSWIM2Q8NEG5 633 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 P2RY11Q96G91 374 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 HPDLQ96IR7 371 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 CDK5RAP3Q96JB5 506 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 SLC6A18Q96N87 628 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 FIZ1Q96SL8 496 aa15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 KLF16Q9BXK1 252 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC6B-207ENST00000557764 MTMR12Q9C0I1 747 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms