RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 USP3Q9Y6I4 520 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 BIN1O00499 593 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 HOXC11O43248 304 aaPredicted RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 SART1O43290 800 aaKnown RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 LRP3O75074 770 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 CYP17A1P05093 508 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 TDGF1P13385 188 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 RARGP13631 454 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 CD19P15391 556 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 CHKAP35790 457 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 ZNF445P59923 1031 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 MRPS21P82921 87 aaKnown RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 MEA1Q16626 185 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 C10orf120Q5SQS8 335 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 ISM2Q6H9L7 571 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 HTR3DQ70Z44 454 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 RSRC2Q7L4I2 434 aaKnown RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 WDR5BQ86VZ2 330 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 TRIM59Q8IWR1 403 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 SIX6OS1Q8N1H7 587 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 PPM1KQ8N3J5 372 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 RIN3Q8TB24 985 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 GOLGA1Q92805 767 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 XPO6Q96QU8 1125 aaKnown RBP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 PNKPQ96T60 521 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 CCSER2Q9H7U1 834 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 TMPRSS4Q9NRS4 437 aa11.99□□□□□ -0.49
LINC00648-204ENST00000557749 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00648-204ENST00000557749 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 OTOL1A6NHN0 477 aaPredicted RBP11.98□□□□□ -0.49
LINC00648-204ENST00000557749 HHLA1C9JL84 531 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 CYP26A1O43174 497 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 BEST1O76090 585 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 ALDH1A2O94788 518 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 APBB3O95704 486 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 ZBED1O96006 694 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 EGFP01133 1207 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 GRIA2P42262 883 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 TNFRSF4P43489 277 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
LINC00648-204ENST00000557749 GOLGA7BQ2TAP0 167 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 RAB41Q5JT25 222 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 TSSK4Q6SA08 328 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 Q6ZS52 159 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 PIGZQ86VD9 579 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 SCML4Q8N228 414 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 ELMO3Q96BJ8 720 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 ARID3AQ99856 593 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 SRRTQ9BXP5 876 aaKnown RBP11.98□□□□□ -0.49
LINC00648-204ENST00000557749 NUP62CLQ9H1M0 184 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 LINC00597Q9H2U6 94 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 CNGB3Q9NQW8 809 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 SPHK2Q9NRA0 654 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 DEC1Q9P2X7 70 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 TSPAN16Q9UKR8 245 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
LINC00648-204ENST00000557749 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 GTPBP10A4D1E9 387 aaKnown RBP11.97□□□□□ -0.49
LINC00648-204ENST00000557749 K7ESF4 209 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 MED7O43513 233 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 LILRA1O75019 489 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 FBXO21O94952 628 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 KAT7O95251 611 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 BMP6P22004 513 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 TKTL1P51854 596 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 DGKEP52429 567 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 MFAP3P55082 362 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 RAB15P59190 212 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 FOXK2Q01167 660 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 LMNB2Q03252 620 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 SIM2Q14190 667 aaPredicted RBP11.97□□□□□ -0.49
LINC00648-204ENST00000557749 GAS6Q14393 721 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 EOGTQ5NDL2 527 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 LCLAT1Q6UWP7 414 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 CLEC17AQ6ZS10 378 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 CEP68Q76N32 757 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.97□□□□□ -0.49
LINC00648-204ENST00000557749 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 RNF139Q8WU17 664 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 KCTD13Q8WZ19 329 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 PLD4Q96BZ4 506 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 CHFRQ96EP1 664 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 LOXL4Q96JB6 756 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 CLSTN2Q9H4D0 955 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 ARHGEF4Q9NR80 690 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 MARK1Q9P0L2 795 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 EBF1Q9UH73 591 aa11.97□□□□□ -0.49
LINC00648-204ENST00000557749 A0A0A0MRY4 1105 aa11.96□□□□□ -0.49
LINC00648-204ENST00000557749 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.49
LINC00648-204ENST00000557749 O00370 1275 aa11.96□□□□□ -0.49
LINC00648-204ENST00000557749 ZIC2O95409 532 aaPredicted RBP11.96□□□□□ -0.49
LINC00648-204ENST00000557749 CYBBP04839 570 aa11.96□□□□□ -0.49
LINC00648-204ENST00000557749 RETP07949 1114 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms