RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 AFF3P51826 1226 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TERF1P54274 439 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TIRAPP58753 221 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 RNASE9P60153 205 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SP2Q02086 613 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TAP2Q03519 686 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TUBB3Q13509 450 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 BFSP2Q13515 415 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CLCA4Q14CN2 919 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ACOX1Q15067 660 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SEC23BQ15437 767 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TBRG1Q3YBR2 411 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 FAM133BQ5BKY9 247 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 DCAF17Q5H9S7 520 aaPredicted RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SPECC1Q5M775 1068 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CFAP58Q5T655 872 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 MFSD4BQ5TF39 518 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 C1QL3Q5VWW1 255 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 LIPMQ5VYY2 423 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SLC9A4Q6AI14 798 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CCDC144NLQ6NUI1 221 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SLC22A25Q6T423 547 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ATF7IPQ6VMQ6 1270 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ATG14Q6ZNE5 492 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ARHGEF18Q6ZSZ5 1173 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 KRT77Q7Z794 578 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CPLX4Q7Z7G2 160 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TAX1BP1Q86VP1 789 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 OR4N4Q8N0Y3 316 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 D2HGDHQ8N465 521 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 Q8NA96 180 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TP53I13Q8NBR0 393 aaPredicted RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CREB3L4Q8TEY5 395 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ATG4AQ8WYN0 398 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 GNRHR2Q96P88 292 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 PAAF1Q9BRP4 392 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 FUZQ9BT04 418 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 VN1R3Q9BXE9 311 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 AP1M1Q9BXS5 423 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 MEGF9Q9H1U4 602 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 PDCL3Q9H2J4 239 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 STN1Q9H668 368 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SEC61A2Q9H9S3 476 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 MSL2Q9HCI7 577 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TMLHEQ9NVH6 421 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 PLA2G3Q9NZ20 509 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 RNF181Q9P0P0 153 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 ADD3Q9UEY8 706 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 CNOT7Q9UIV1 285 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 RAB21Q9UL25 225 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 TRPC5Q9UL62 973 aaPredicted RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 NAALADL1Q9UQQ1 740 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 DRG1Q9Y295 367 aaKnown RBP3.48□□□□□ -1.85
TRAV28-201ENST00000557548 NEU2Q9Y3R4 380 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 PCDHA10Q9Y5I2 948 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 FER1L4A9Z1Z3 1794 aa3.48□□□□□ -1.85
TRAV28-201ENST00000557548 SPATA31A3Q5VYP0 1347 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PRAMEF33A0A0G2JMD5 474 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 TCAF2A6NFQ2 919 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 M0QZQ0 153 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 AP3D1O14617 1153 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 TNPO2O14787 897 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 P4HA2O15460 535 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 TRIAP1O43715 76 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PRAMEF10O60809 474 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 RECQL4O94761 1208 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 SGPL1O95470 568 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 STARD3NLO95772 234 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 MLYCDO95822 493 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 HLA-DOAP06340 250 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PDHA1P08559 390 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 WEE2P0C1S8 567 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 HSPA1AP0DMV8 641 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 HSPA1BP0DMV9 641 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 TMEM225BP0DP42 221 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 MED14OSP0DP75 135 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 ACADMP11310 421 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 ACP5P13686 325 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 ALADP13716 330 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 GALNSP34059 522 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 RGS2P41220 211 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 RABGGTBP53611 331 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 SLURP1P55000 103 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 EIF4A1P60842 406 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PPP2CBP62714 309 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PPP2CAP67775 309 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 FPGSQ05932 587 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 KIAA2012Q0VF49 1180 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 FOXL1Q12952 345 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 MTAPQ13126 283 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 CUL4AQ13619 759 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 DYRK1AQ13627 763 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 DCTN1Q14203 1278 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 EIF4A2Q14240 407 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 GEN1Q17RS7 908 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 AAK1Q2M2I8 961 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 ALDH1L2Q3SY69 923 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 PDCD4Q53EL6 469 aaKnown RBP3.47□□□□□ -1.85
TRAV28-201ENST00000557548 CBWD5Q5RIA9 395 aa3.47□□□□□ -1.85
TRAV28-201ENST00000557548 MICALCLQ6ZW33 695 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms