RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ANAPC1Q9H1A4 1944 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PLXND1Q9Y4D7 1925 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ADAMTS9Q9P2N4 1935 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF840PA6NDX5 716 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SLC9A3R1O14745 358 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 GJB3O75712 270 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 OLFM2O95897 454 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 OAS1P00973 400 aaKnown RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ADH5P11766 374 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 PFKLP17858 780 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 GABRG2P18507 467 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 BDNFP23560 247 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 PCSK1P29120 753 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ABCD1P33897 745 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 GRIK1P39086 918 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 TNFRSF4P43489 277 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 LHX1P48742 406 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF33AQ06730 810 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 TRIP6Q15654 476 aaKnown RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SOWAHAQ2M3V2 549 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 RILPL1Q5EBL4 403 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ARL6IP4Q66PJ3 421 aaKnown RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 MCTP1Q6DN14 999 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 FAM171BQ6P995 826 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 C4orf50Q6ZRC1 276 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 DENND5BQ6ZUT9 1274 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SFR1Q86XK3 245 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SLC41A1Q8IVJ1 513 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 BRSK2Q8IWQ3 736 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 CSGALNACT2Q8N6G5 542 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 TOP6BLQ8N6T0 577 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 LRRC52Q8N7C0 313 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 PNPLA1Q8N8W4 532 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 GPATCH11Q8N954 259 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 KBTBD7Q8WVZ9 684 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 RAD54LQ92698 747 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ERLEC1Q96DZ1 483 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SAAL1Q96ER3 474 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 HSPA12BQ96MM6 686 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 BBC3Q96PG8 261 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-207ENST00000557470 SYT15Q9BQS2 421 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 FAM213AQ9BRX8 229 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 TTLL2Q9BWV7 592 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 MTMR12Q9C0I1 747 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ST6GALNAC4Q9H4F1 302 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 CRTAC1Q9NQ79 661 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 CALCOCO1Q9P1Z2 691 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 CFAP97Q9P2B7 532 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 ITGA11Q9UKX5 1188 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 HCN2Q9UL51 889 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 RAXQ9Y2V3 346 aa6.23□□□□□ -1.41
VPS33B-207ENST00000557470 CFAP46Q8IYW2 2715 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 IGHV1OR15-9A0A0B4J2B8 117 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 A0A1W2PQF6 199 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 TBC1D3BA6NDS4 549 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 F8VP50 259 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 SLC26A4O43511 780 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 IL2RAP01589 272 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 KRT19P08727 400 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 LMO2P25791 158 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 UBA7P41226 1012 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 WASP42768 502 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 NOP14P78316 857 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 RBP5P82980 135 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 GRIN1Q05586 938 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 TAF10Q12962 218 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 SLC14A1Q13336 389 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 HNRNPDQ14103 355 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 POSTNQ15063 836 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 DBN1Q16643 649 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 LY6G5CQ5SRR4 150 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF385CQ66K41 422 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 VSTM1Q6UX27 236 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 SLC36A4Q6YBV0 504 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CCNI2Q6ZMN8 369 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF720Q7Z2F6 126 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 LIMS2Q7Z4I7 341 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 RABEPKQ7Z6M1 372 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 MIB1Q86YT6 1006 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 NAXDQ8IW45 347 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ETFBKMTQ8IXQ9 262 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF513Q8N8E2 541 aaPredicted RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 KIAA1958Q8N8K9 716 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 NAT16Q8N8M0 369 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 TRIML1Q8N9V2 468 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 MDM1Q8TC05 714 aa6.22□□□□□ -1.41
VPS33B-207ENST00000557470 CACTINQ8WUQ7 758 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 HNRNPLLQ8WVV9 542 aaKnown RBP6.22□□□□□ -1.41
VPS33B-207ENST00000557470 ADAMTS14Q8WXS8 1223 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms