RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CHADO15335 359 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ATG13O75143 517 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 B3GAT3O94766 335 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 RHOBTB1O94844 696 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 NPTXRO95502 500 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CCDC192P0DO97 292 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ATF2P15336 505 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CSRP1P21291 193 aaKnown RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 PAX7P23759 505 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ABCD1P33897 745 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ARL2P36404 184 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 MPLP40238 635 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CD151P48509 253 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CBX1P83916 185 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 POU4F1Q01851 419 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ARID5AQ03989 594 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 EMC2Q15006 297 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 EPHA7Q15375 998 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 DPY19L1Q2PZI1 675 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ADGRF1Q5T601 910 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 MOXD1Q6UVY6 613 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SYDE1Q6ZW31 735 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF605Q86T29 641 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 RALGPS2Q86X27 583 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 TCEAL8Q8IYN2 117 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ELMOD1Q8N336 334 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ZSCAN18Q8TBC5 510 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 TCEAL4Q96EI5 215 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FCRL2Q96LA5 508 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FAM20AQ96MK3 541 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SH3GLB2Q9NR46 395 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CWC15Q9P013 229 aaKnown RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 WHRNQ9P202 907 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 CACNG4Q9UBN1 327 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 SUFUQ9UMX1 484 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 RPS6KL1Q9Y6S9 549 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
ATXN3-247ENST00000557311 LOXHD1Q8IVV2 1947 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM82A0PJX8 343 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 H7C4K7 107 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PTGESO14684 152 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 B4GALT5O43286 388 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 EXTL3O43909 919 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PSPNO60542 156 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 MOSPD3O75425 235 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TDP2O95551 362 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 CAVIN2O95810 425 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 EPHX1P07099 455 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM253P0C7T8 217 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 NAT2P11245 290 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TNNT1P13805 278 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 ARL4AP40617 200 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 CCR2P41597 374 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 CTSKP43235 329 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 KIR2DL1P43626 348 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 KIR2DL2P43627 348 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 EPHA5P54756 1037 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 NLRP5P59047 1200 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 ROR1Q01973 937 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 FCHO2Q0JRZ9 810 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 BECN1Q14457 450 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PTPAQ15257 358 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SF3A1Q15459 793 aaKnown RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 NAB2Q15742 525 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PLK5Q496M5 336 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SOWAHCQ53LP3 525 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 HSP90B2PQ58FF3 399 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 ZFYVE27Q5T4F4 411 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 C1QTNF12Q5T7M4 302 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TPGS2Q68CL5 300 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SASS6Q6UVJ0 657 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 Q6ZS52 159 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 C19orf47Q8N9M1 422 aaKnown RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 FBXO15Q8NCQ5 510 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 UROC1Q96N76 676 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms