RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 VN1R2Q8NFZ6 395 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 PPP2R3CQ969Q6 453 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 RAB6CQ9H0N0 254 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 NMUR1Q9HB89 426 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 SMARCAL1Q9NZC9 954 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 FBXW11Q9UKB1 542 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 CLASP2O75122 1294 aaKnown RBP24.71■■□□□ 1.55
SIX4-203ENST00000556952 TADA3O75528 432 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 RARAP10276 462 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 KLRC2P26717 231 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 PTPN7P35236 360 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 TERF1P54274 439 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 PITX1P78337 314 aaPredicted RBP24.71■■□□□ 1.55
SIX4-203ENST00000556952 TAF10Q12962 218 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 COL19A1Q14993 1142 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 LONRF2Q1L5Z9 754 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 ATP13A4Q4VNC1 1196 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 KCNT1Q5JUK3 1230 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 AADACL2Q6P093 401 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 CCDC149Q6ZUS6 474 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 DQX1Q8TE96 717 aaKnown RBP24.71■■□□□ 1.55
SIX4-203ENST00000556952 TRMT2BQ96GJ1 504 aaKnown RBP24.71■■□□□ 1.55
SIX4-203ENST00000556952 MYRFLQ96LU7 910 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 SMOC2Q9H3U7 446 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 FAM204AQ9H8W3 233 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 CALCOCO1Q9P1Z2 691 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 GLP2RO95838 553 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 GLUD1P00367 558 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 IGLV3-25P01717 112 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 ZDHHC11BP0C7U3 371 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 GBP1P32455 592 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 EPHB3P54753 998 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 AIF1P55008 147 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 TWF1Q12792 350 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 MSANTD2Q6P1R3 559 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 SLC13A5Q86YT5 568 aaPredicted RBP24.7■■□□□ 1.54
SIX4-203ENST00000556952 PSTKQ8IV42 348 aaKnown RBP24.7■■□□□ 1.54
SIX4-203ENST00000556952 EFHBQ8N7U6 833 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 RNF139Q8WU17 664 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 MAIP1Q8WWC4 291 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 KLHL11Q9NVR0 708 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 DDIT4Q9NX09 232 aa24.7■■□□□ 1.54
SIX4-203ENST00000556952 LRRD1A4D1F6 860 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 ATXN1P54253 815 aaKnown RBP24.69■■□□□ 1.54
SIX4-203ENST00000556952 NME3Q13232 169 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 PPP2R5EQ16537 467 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 CTC1Q2NKJ3 1217 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 ERMARDQ5T6L9 678 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 SND1Q7KZF4 910 aaKnown RBP eCLIP24.69■■□□□ 1.54
SIX4-203ENST00000556952 TAC4Q86UU9 113 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 ITIH5Q86UX2 942 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 LRRN4CLQ8ND94 238 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 RAPGEF5Q92565 580 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 HSPH1Q92598 858 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 PABPC5Q96DU9 382 aaKnown RBP24.69■■□□□ 1.54
SIX4-203ENST00000556952 SNRNP25Q9BV90 132 aaKnown RBP24.69■■□□□ 1.54
SIX4-203ENST00000556952 OLA1Q9NTK5 396 aaKnown RBP24.69■■□□□ 1.54
SIX4-203ENST00000556952 PIGVQ9NUD9 493 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.69■■□□□ 1.54
SIX4-203ENST00000556952 CLDND1Q9NY35 253 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 MAGED2Q9UNF1 606 aaPredicted RBP24.69■■□□□ 1.54
SIX4-203ENST00000556952 ASB3Q9Y575 518 aa24.69■■□□□ 1.54
SIX4-203ENST00000556952 RALAP11233 206 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 HMGA1P17096 107 aaKnown RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 KDELR1P24390 212 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 PGFP49763 221 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 KCNC3Q14003 757 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 TAF12Q16514 161 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 TFDP3Q5H9I0 405 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 SPOCD1Q6ZMY3 1216 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 RTL10Q7L3V2 364 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 FAM131BQ86XD5 332 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 VSIG1Q86XK7 387 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 KCTD6Q8NC69 237 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 NTAN1Q96AB6 310 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 RNF25Q96BH1 459 aaPredicted RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 ACSF2Q96CM8 615 aaPredicted RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 CDK5RAP1Q96SZ6 601 aaKnown RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 CDCA3Q99618 268 aaPredicted RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 OSBPL8Q9BZF1 889 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 WDR6Q9NNW5 1121 aaKnown RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 OSER1Q9NX31 292 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 UXTQ9UBK9 157 aaPredicted RBP24.68■■□□□ 1.54
SIX4-203ENST00000556952 EFR3BQ9Y2G0 817 aa24.68■■□□□ 1.54
SIX4-203ENST00000556952 GOLGA6L10A0A0M3HER8 536 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 C3orf70A6NLC5 250 aaPredicted RBP24.67■■□□□ 1.54
SIX4-203ENST00000556952 CCDC188H7C350 402 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 KRIT1O00522 736 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 TBX10O75333 385 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 LTBRP36941 435 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 DLX2Q07687 328 aaPredicted RBP24.67■■□□□ 1.54
SIX4-203ENST00000556952 ADAM15Q13444 863 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 PDK2Q15119 407 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 SNX30Q5VWJ9 437 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 MFSD7Q6UXD7 560 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 EP400NLQ6ZTU2 488 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 RSRC2Q7L4I2 434 aaKnown RBP24.67■■□□□ 1.54
SIX4-203ENST00000556952 MAP7D3Q8IWC1 876 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 ZNF276Q8N554 614 aa24.67■■□□□ 1.54
SIX4-203ENST00000556952 KREMEN2Q8NCW0 462 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms