RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 PDHA1P08559 390 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 ATXN1LP0C7T5 689 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 VIPR2P41587 438 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 MAPK10P53779 464 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 SP2Q02086 613 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 NHLH1Q02575 133 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 RAB32Q13637 225 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 TAF7Q15545 349 aaPredicted RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 DEFB115Q30KQ5 88 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 ZIK1Q3SY52 487 aaPredicted RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 IL31Q6EBC2 164 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 KIF6Q6ZMV9 814 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 CNTROBQ8N137 903 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 GPC2Q8N158 579 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 B3GALNT2Q8NCR0 500 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 MYCBPAPQ8TBZ2 947 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 PARD3BQ8TEW8 1205 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 PNISRQ8TF01 805 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 TRIM43Q96BQ3 446 aaPredicted RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 TBCBQ99426 244 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 TPSD1Q9BZJ3 242 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 ZNF518BQ9C0D4 1074 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 NUP62CLQ9H1M0 184 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 AFF4Q9UHB7 1163 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 FRMD4BQ9Y2L6 1034 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 KIAA1551Q9HCM1 1747 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 CNTNAP1P78357 1384 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 NPC1L1Q9UHC9 1359 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 RHPN2P1A8MT19 583 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 PYCARD-AS1I3L0S3 204 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 KPNA5O15131 536 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 PROM1O43490 865 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 TRIAP1O43715 76 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 MYL1P05976 194 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 RHOP08100 348 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 CHRM2P08172 466 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 GPD1P21695 349 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 CD6P30203 668 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 PXNP49023 591 aaPredicted RBP6.06□□□□□ -1.44
HIF1A-209ENST00000556827 TSTD2Q5T7W7 516 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 ARHGAP40Q5TG30 622 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 KIAA0895LQ68EN5 471 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 MCM10Q7L590 875 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 NGEFQ8N5V2 710 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 PHKBQ93100 1093 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 NMD3Q96D46 503 aaKnown RBP6.06□□□□□ -1.44
HIF1A-209ENST00000556827 RBM17Q96I25 401 aaKnown RBP6.06□□□□□ -1.44
HIF1A-209ENST00000556827 PGBD1Q96JS3 809 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 MESP1Q9BRJ9 268 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 STK31Q9BXU1 1019 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 ACTRT3Q9BYD9 372 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 ARFGEF1Q9Y6D6 1849 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 CEMIPQ8WUJ3 1361 aa6.06□□□□□ -1.44
HIF1A-209ENST00000556827 ERVV-1B6SEH8 477 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PPM1DO15297 605 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 KCNQ3O43525 872 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PROP1O75360 226 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 SOAT2O75908 522 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 ERBB2P04626 1255 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 GRIA3P42263 894 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PIP4K2AP48426 406 aaPredicted RBP6.05□□□□□ -1.44
HIF1A-209ENST00000556827 NEK3P51956 506 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 LBX1P52954 281 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 LOXL3P58215 753 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 KRT17Q04695 432 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 GRM1Q13255 1194 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 HLTFQ14527 1009 aaKnown RBP eCLIP6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PLA1AQ53H76 456 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PPP1R42Q7Z4L9 355 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 KRT78Q8N1N4 520 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 FAM136AQ96C01 138 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 OSBPL9Q96SU4 736 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 PSMD1Q99460 953 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 A1CFQ9NQ94 594 aaKnown RBP6.05□□□□□ -1.44
HIF1A-209ENST00000556827 SERHLQ9NQF3 203 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 CHST12Q9NRB3 414 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 ARPP21Q9UBL0 812 aaPredicted RBP6.05□□□□□ -1.44
HIF1A-209ENST00000556827 SERTAD3Q9UJW9 196 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 SSX2IPQ9Y2D8 614 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 RRP7AQ9Y3A4 280 aaKnown RBP6.05□□□□□ -1.44
HIF1A-209ENST00000556827 ENTPD2Q9Y5L3 495 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 TJP1Q07157 1748 aa6.05□□□□□ -1.44
HIF1A-209ENST00000556827 RNF123Q5XPI4 1314 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 PASKQ96RG2 1323 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 ZNF541Q9H0D2 1346 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 RBMXL2O75526 392 aaKnown RBP6.04□□□□□ -1.44
HIF1A-209ENST00000556827 RASSF9O75901 435 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 NBPF7P0C2Y1 421 aaPredicted RBP6.04□□□□□ -1.44
HIF1A-209ENST00000556827 IL1R1P14778 569 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 PRIM2P49643 509 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
HIF1A-209ENST00000556827 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 RGS7BPQ6MZT1 257 aaPredicted RBP6.04□□□□□ -1.44
HIF1A-209ENST00000556827 USP50Q70EL3 339 aaPredicted RBP6.04□□□□□ -1.44
HIF1A-209ENST00000556827 LIX1LQ8IVB5 337 aa6.04□□□□□ -1.44
HIF1A-209ENST00000556827 FAM109AQ8N4B1 249 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms