RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 KAT7O95251 611 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 TYRP14679 529 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 ZNF18P17022 549 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 RPL34P49207 117 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 COG7P83436 770 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 PTK2Q05397 1052 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 SRSF5Q13243 272 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 SYCP1Q15431 976 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 MEA1Q16626 185 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 C2orf27AQ580R0 203 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 FKBP15Q5T1M5 1219 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 TAF3Q5VWG9 929 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 ZC3H14Q6PJT7 736 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 TOGARAM2Q6ZUX3 1019 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 APTXQ7Z2E3 356 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 DHX40Q8IX18 779 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 NELL1Q92832 810 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 EXOC4Q96A65 974 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 FAM149B1Q96BN6 582 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 PLD4Q96BZ4 506 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 CPXM1Q96SM3 734 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 PNKPQ96T60 521 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 FUCA2Q9BTY2 467 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 DNAJC17Q9NVM6 304 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 ZSCAN32Q9NX65 697 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 LIMA1Q9UHB6 759 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 AGO1Q9UL18 857 aaKnown RBP10.84□□□□□ -0.67
SNX6-208ENST00000556712 SIK3Q9Y2K2 1263 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 PCDHGA2Q9Y5H1 932 aa10.84□□□□□ -0.67
SNX6-208ENST00000556712 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 GFPT2O94808 682 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 PAPSS2O95340 614 aaPredicted RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 ERBB2P04626 1255 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 APODP05090 189 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 FYNP06241 537 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 TPM2P07951 284 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 NCAM1P13591 858 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 CYP11B1P15538 503 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 TIE1P35590 1138 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 EIF2DP41214 584 aaKnown RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 ACADSBP45954 432 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 PITX1P78337 314 aaPredicted RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 PPP2R5DQ14738 602 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 TAF5Q15542 800 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 TRIP4Q15650 581 aaPredicted RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 KLHL40Q2TBA0 621 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 FBXO43Q4G163 708 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 PTPN20Q4JDL3 420 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 C10orf76Q5T2E6 689 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 EMC10Q5UCC4 262 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 MSANTD2Q6P1R3 559 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 FAM183BPQ6ZVS7 135 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 NOP9Q86U38 636 aaKnown RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 TAC4Q86UU9 113 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 CCDC33Q8N5R6 958 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 DQX1Q8TE96 717 aaKnown RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 USP33Q8TEY7 942 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 GOLGA1Q92805 767 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 PCMTD1Q96MG8 357 aaPredicted RBP10.83□□□□□ -0.68
SNX6-208ENST00000556712 NLRC4Q9NPP4 1024 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 MARK1Q9P0L2 795 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 PCDHGC3Q9UN70 934 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 NAALADL1Q9UQQ1 740 aa10.83□□□□□ -0.68
SNX6-208ENST00000556712 CACNG3O60359 315 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 TSPAN3O60637 253 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 LILRB5O75023 590 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 GRAP2O75791 330 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 IGLV3-27P01718 113 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
SNX6-208ENST00000556712 KRT9P35527 623 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 GRIA2P42262 883 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 SGSHP51688 502 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 DMC1Q14565 340 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 LPAL2Q16609 132 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 SYPL2Q5VXT5 272 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 GRAMD4Q6IC98 578 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 TMEM110Q86TL2 294 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 ALLCQ8N6M5 410 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 TERB1Q8NA31 727 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 ANKRD20A12PQ8NF67 263 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 SLC20A1Q8WUM9 679 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 ATRIPQ8WXE1 791 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 ACDQ96AP0 544 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 ERLEC1Q96DZ1 483 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 PPP1R13BQ96KQ4 1090 aa10.82□□□□□ -0.68
SNX6-208ENST00000556712 STK33Q9BYT3 514 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms