RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 EFHC1Q5JVL4 640 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 KCNT2Q6UVM3 1135 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 ARCQ7LC44 396 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 STRADAQ7RTN6 431 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 YTHDF3Q7Z739 585 aaKnown RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PRPF39Q86UA1 669 aaKnown RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 VSIG1Q86XK7 387 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CDKL3Q8IVW4 592 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TP53INP2Q8IXH6 220 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PALM2Q8IXS6 379 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PDIK1LQ8N165 341 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 HASPINQ8TF76 798 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 MZB1Q8WU39 189 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TGS1Q96RS0 853 aaKnown RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 KCNK16Q96T55 309 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 KLF6Q99612 283 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 RTP3Q9BQQ7 232 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 C12orf65Q9H3J6 166 aaKnown RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PIGVQ9NUD9 493 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 NKIRAS1Q9NYS0 192 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 SLC24A2Q9UI40 661 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TEX264Q9Y6I9 313 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CENPFP49454 3210 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 I6L893 689 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 KPNA6O60684 536 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 AP1G2O75843 785 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 POMCP01189 267 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 ASGR1P07306 291 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 FAM200BP0CF97 657 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 ATXN8OSP0DMR3 200 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 DESP17661 470 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TAC1P20366 129 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PHBP35232 272 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 RPA3P35244 121 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 FCGRTP55899 365 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 NME3Q13232 169 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 KCNA10Q16322 511 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TIGD5Q53EQ6 642 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 DSTYKQ6XUX3 929 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CCDC121Q6ZUS5 278 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 ZNF534Q76KX8 674 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 BNIPLQ7Z465 357 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CAND1Q86VP6 1230 aaKnown RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 MPP5Q8N3R9 675 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 DENND1AQ8TEH3 1009 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CCT6BQ92526 530 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 PCED1BQ96HM7 432 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 SLC2A13Q96QE2 648 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 NPY6RQ99463 290 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 POPDC2Q9HBU9 364 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 LRRC4Q9HBW1 653 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 DTLQ9NZJ0 730 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 GGT7Q9UJ14 662 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TTLL3Q9Y4R7 772 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TLL2Q9Y6L7 1015 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CAPN7Q9Y6W3 813 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TCRBV9S1A1TA0A576 114 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 YJEFN3A6XGL0 299 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 ZNF487B1APH4 448 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 E7ENQ6 273 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 F8W810 466 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 GOLGA8RI6L899 631 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 M0QYT0 321 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 CA12O43570 354 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 FAM155BO75949 473 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 APRTP07741 180 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 ELNP15502 786 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 RDXP35241 583 aaKnown RBP10.49□□□□□ -0.73
TMEM260-211ENST00000556648 GRIA1P42261 906 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 BRCC3P46736 316 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 SREBF2Q12772 1141 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 NUGGCQ68CJ6 796 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 CD300LGQ6UXG3 332 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 RSPH3Q86UC2 560 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 SIX6OS1Q8N1H7 587 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 RNF139Q8WU17 664 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 KCTD13Q8WZ19 329 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 TMEM209Q96SK2 561 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 LGMNQ99538 433 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 CEP41Q9BYV8 373 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 XPNPEP3Q9NQH7 507 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 ARHGEF4Q9NR80 690 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 ABCF3Q9NUQ8 709 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 SLC38A7Q9NVC3 462 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 ABT1Q9ULW3 272 aaKnown RBP10.49□□□□□ -0.73
TMEM260-211ENST00000556648 PADI3Q9ULW8 664 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 SNX10Q9Y5X0 201 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 THSD7BQ9C0I4 1608 aa10.49□□□□□ -0.73
TMEM260-211ENST00000556648 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
TMEM260-211ENST00000556648 CCT8L1PA6NM43 557 aa10.48□□□□□ -0.73
TMEM260-211ENST00000556648 CXorf49A8MYA2 514 aaPredicted RBP10.48□□□□□ -0.73
TMEM260-211ENST00000556648 HHLA1C9JL84 531 aa10.48□□□□□ -0.73
TMEM260-211ENST00000556648 FAM72CH0Y354 149 aa10.48□□□□□ -0.73
TMEM260-211ENST00000556648 PRPF4O43172 522 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms