RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 TTC30AQ86WT1 665 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ENGASEQ8NFI3 743 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 USP33Q8TEY7 942 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 TMEM176AQ96HP8 235 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 LOXL4Q96JB6 756 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 XPO6Q96QU8 1125 aaKnown RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 CDK5RAP1Q96SZ6 601 aaKnown RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 DUSP16Q9BY84 665 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ARRDC1-AS1Q9H2J1 176 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ARHGEF4Q9NR80 690 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 SPHK2Q9NRA0 654 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 CISHQ9NSE2 258 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 SEMA4GQ9NTN9 838 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 DLL3Q9NYJ7 618 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 ARMCX3Q9UH62 379 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 NAGPAQ9UK23 515 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 MMP17Q9ULZ9 603 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 PTPRZ1P23471 2315 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 EML5Q05BV3 1969 aa8.1□□□□□ -1.11
HNRNPC-226ENST00000556628 MYO15AQ9UKN7 3530 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 A0A1W2PQH9 124 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 K7EQS6 105 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CYP26A1O43174 497 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 GBP1P32455 592 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 TNFRSF4P43489 277 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 PLA2G4AP47712 749 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 SLC6A11P48066 632 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 PTK2Q05397 1052 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CETN1Q12798 172 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CCDC40Q4G0X9 1142 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 AASDHQ4L235 1098 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 USP39Q53GS9 565 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 EOGTQ5NDL2 527 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 C10orf120Q5SQS8 335 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 ARHGAP17Q68EM7 881 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 HTR3DQ70Z44 454 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 TRMT11Q7Z4G4 463 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 KBTBD6Q86V97 674 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 BBS7Q8IWZ6 715 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 ELOA2Q8IYF1 753 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 PGBD3Q8N328 593 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 ARHGAP18Q8N392 663 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CCDC33Q8N5R6 958 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 NAT16Q8N8M0 369 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 SPATA20Q8TB22 786 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 WHAMMQ8TF30 809 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 ERCC4Q92889 916 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 DHTKD1Q96HY7 919 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CDK15Q96Q40 435 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 RTKNQ9BST9 563 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 TPSD1Q9BZJ3 242 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 CYLDQ9NQC7 956 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 EBF1Q9UH73 591 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 DNMT3LQ9UJW3 386 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-226ENST00000556628 DMDP11532 3685 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 MYOFQ9NZM1 2061 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 BICDL2A1A5D9 508 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TRIM49BA6NDI0 452 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 HHLA1C9JL84 531 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 NEDD8-MDP1E9PL57 170 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 HOXC11O43248 304 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 EPN2O95208 641 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 KLF8O95600 359 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TBX18O95935 607 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CD19P15391 556 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TGM1P22735 817 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TBXAS1P24557 533 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 HOXC13P31276 330 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 KIF11P52732 1056 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 BCAT1P54687 386 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 RAD23BP54727 409 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 MCCD1P59942 119 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 COG7P83436 770 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 LRMPQ12912 555 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CUL2Q13617 745 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 BYSLQ13895 437 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CRY1Q16526 586 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 PLK5Q496M5 336 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 SGO2Q562F6 1265 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 C10orf76Q5T2E6 689 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 IL31Q6EBC2 164 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 GRAMD4Q6IC98 578 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 SDE2Q6IQ49 451 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms