RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SMPD4Q9NXE4 827 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 MARCH2Q9P0N8 246 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 CALCOCO1Q9P1Z2 691 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 SALL4Q9UJQ4 1053 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 DNMT3LQ9UJW3 386 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 BRWD1Q9NSI6 2320 aa18.17■□□□□ 0.5
TUBB3-211ENST00000556536 SOBPA7XYQ1 873 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 MSI1O43347 362 aaKnown RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 PRAMEF12O95522 483 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 IGLV3-25P01717 112 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 CKMP06732 381 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 CCDC175P0C221 793 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 MBL2P11226 248 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ALADP13716 330 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 PFKLP17858 780 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 SP100P23497 879 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 GBP2P32456 591 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 SULT1E1P49888 294 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 SLC7A9P82251 487 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ZXDBP98169 803 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 TCEAL1Q15170 157 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 SMAD2Q15796 467 aaKnown RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 RAB6CQ53S08 254 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 FAM78AQ5JUQ0 283 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ST13P5Q8NFI4 369 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ZSCAN18Q8TBC5 510 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 NT5C3BQ969T7 300 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ZFRQ96KR1 1074 aaKnown RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 KLF16Q9BXK1 252 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-211ENST00000556536 RAB6CQ9H0N0 254 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 GKN1Q9NS71 199 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.16■□□□□ 0.53e-7■■■□□ 15.4
TUBB3-211ENST00000556536 GDE1Q9NZC3 331 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 UVRAGQ9P2Y5 699 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 CCL26Q9Y258 94 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 PPP2R2CQ9Y2T4 447 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 CPQQ9Y646 472 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 DOCK6Q96HP0 2047 aa18.16■□□□□ 0.5
TUBB3-211ENST00000556536 MUC6Q6W4X9 2439 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 SYNJ2BP-COX16A0A087WUM0 186 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 SLC12A8A0AV02 714 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 DPYSL4O14531 572 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 CCP110O43303 1012 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 MTA2O94776 668 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 TRUB2O95900 331 aaKnown RBP18.15■□□□□ 0.5
TUBB3-211ENST00000556536 SDC4P31431 198 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 AVPR1AP37288 418 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 PTPN9P43378 593 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ZNF143P52747 638 aaPredicted RBP18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ATP11AP98196 1134 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 SLC25A52Q3SY17 297 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ARID3BQ8IVW6 561 aaPredicted RBP18.15■□□□□ 0.5
TUBB3-211ENST00000556536 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 USP13Q92995 863 aaPredicted RBP18.15■□□□□ 0.5
TUBB3-211ENST00000556536 WBP2Q969T9 261 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ASB16Q96NS5 453 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 FAM204AQ9H8W3 233 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 COX16Q9P0S2 106 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ZMYM5Q9UJ78 669 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 STAP1Q9ULZ2 295 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 MYO16Q9Y6X6 1858 aa18.15■□□□□ 0.5
TUBB3-211ENST00000556536 ZNF638Q14966 1978 aaKnown RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 A0A0A6YYK5 440 aaPredicted RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 BTNL10A8MVZ5 291 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 M0QYT0 321 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 HMBSP08397 361 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 LAMP2P13473 410 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 IL9P15248 144 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 PSMA2P25787 234 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 VIPR2P41587 438 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 ARHGAP25P42331 645 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 ATXN1P54253 815 aaKnown RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 KIF5AQ12840 1032 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 NME3Q13232 169 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 EIF4EBP2Q13542 120 aaPredicted RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 PUS10Q3MIT2 529 aaKnown RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 OTOP3Q7RTS5 596 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 BNIPLQ7Z465 357 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 RIN3Q8TB24 985 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 RSPRY1Q96DX4 576 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 CNPY3Q9BT09 278 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 PHF7Q9BWX1 381 aaPredicted RBP18.14■□□□□ 0.49
TUBB3-211ENST00000556536 DDIT4Q9NX09 232 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 RRN3Q9NYV6 651 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
TUBB3-211ENST00000556536 C5orf42Q9H799 3197 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 C2CD4DB7Z1M9 353 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 IRAK2O43187 625 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 IRF1P10914 325 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 FCARP24071 287 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 WEE1P30291 646 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
TUBB3-211ENST00000556536 TRIP4Q15650 581 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-211ENST00000556536 CDO1Q16878 200 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 CPNE8Q86YQ8 564 aa18.13■□□□□ 0.49
TUBB3-211ENST00000556536 ARFGAP1Q8N6T3 406 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms