RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 HOOK1Q9UJC3 728 aaKnown RBP23.72■■□□□ 1.39
ACTN1-220ENST00000556433 A0A1W2PQF6 199 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 CHKAP35790 457 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 PTGER3P43115 390 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 YWHAGP61981 247 aaKnown RBP eCLIP23.71■■□□□ 1.39
ACTN1-220ENST00000556433 IRX4P78413 519 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 LRRC63Q05C16 580 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 LRMPQ12912 555 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 GOLGA7BQ2TAP0 167 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 TIGD1Q96MW7 591 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 STRIP2Q9ULQ0 834 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 GON4LQ3T8J9 2241 aa23.71■■□□□ 1.39
ACTN1-220ENST00000556433 KCNK5O95279 499 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 ZBED1O96006 694 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 CD19P15391 556 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 CORO1AP31146 461 aaKnown RBP23.7■■□□□ 1.38
ACTN1-220ENST00000556433 YWHAEP62258 255 aaKnown RBP23.7■■□□□ 1.38
ACTN1-220ENST00000556433 PDE4CQ08493 712 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 SGO2Q562F6 1265 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 SPDYCQ5MJ68 293 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 DAB2IPQ5VWQ8 1189 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 ISM2Q6H9L7 571 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 IPO4Q8TEX9 1081 aaKnown RBP23.7■■□□□ 1.38
ACTN1-220ENST00000556433 SLC35C1Q96A29 364 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 ERLEC1Q96DZ1 483 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 P2RY11Q96G91 374 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 ULBP1Q9BZM6 244 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 MARCH2Q9P0N8 246 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 CALCOCO1Q9P1Z2 691 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 FBXO10Q9UK96 956 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 TSPAN16Q9UKR8 245 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 NUP205Q92621 2012 aa23.7■■□□□ 1.38
ACTN1-220ENST00000556433 SLC12A8A0AV02 714 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 TULP2O00295 520 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 STIM1Q13586 685 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 PM20D1Q6GTS8 502 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 SYT12Q8IV01 421 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 NDRG1Q92597 394 aaKnown RBP23.69■■□□□ 1.38
ACTN1-220ENST00000556433 GABRG3Q99928 467 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 LRRC4Q9HBW1 653 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 METTL14Q9HCE5 456 aaKnown RBP23.69■■□□□ 1.38
ACTN1-220ENST00000556433 TMEM9BQ9NQ34 198 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 HESX1Q9UBX0 185 aa23.69■■□□□ 1.38
ACTN1-220ENST00000556433 AGO1Q9UL18 857 aaKnown RBP23.69■■□□□ 1.38
ACTN1-220ENST00000556433 PSMA7O14818 248 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 XPO1O14980 1071 aaKnown RBP23.68■■□□□ 1.38
ACTN1-220ENST00000556433 PENKP01210 267 aaPredicted RBP23.68■■□□□ 1.38
ACTN1-220ENST00000556433 BCAT1P54687 386 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 TRIM61Q5EBN2 209 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 LYSMD4Q5XG99 296 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 KIAA1211LQ6NV74 962 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 SLC36A4Q6YBV0 504 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 DENND1CQ8IV53 801 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 DEFB119Q8N690 84 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 UBA3Q8TBC4 463 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 DHTKD1Q96HY7 919 aaPredicted RBP23.68■■□□□ 1.38
ACTN1-220ENST00000556433 TMEM74BQ9NUR3 256 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 CACNA2D2Q9NY47 1150 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 EVLQ9UI08 416 aaPredicted RBP23.68■■□□□ 1.38
ACTN1-220ENST00000556433 RAD54BQ9Y620 910 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 ACACBO00763 2458 aa23.68■■□□□ 1.38
ACTN1-220ENST00000556433 WASH3PC4AMC7 463 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 CDX4O14627 284 aaPredicted RBP23.67■■□□□ 1.38
ACTN1-220ENST00000556433 AP5Z1O43299 807 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 VDRP11473 427 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 TBXAS1P24557 533 aaPredicted RBP23.67■■□□□ 1.38
ACTN1-220ENST00000556433 RPL6Q02878 288 aaKnown RBP23.67■■□□□ 1.38
ACTN1-220ENST00000556433 BST2Q10589 180 aaKnown RBP23.67■■□□□ 1.38
ACTN1-220ENST00000556433 FYB2Q5VWT5 728 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 PSAPL1Q6NUJ1 521 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 CD248Q9HCU0 757 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 KIAA1257Q9ULG3 409 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 SLC27A6Q9Y2P4 619 aa23.67■■□□□ 1.38
ACTN1-220ENST00000556433 GFRA2O00451 464 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 ZNF217O75362 1048 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 CYBBP04839 570 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 NDUFV2P19404 249 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 ITPKAP23677 461 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 DPP6P42658 865 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 FMO5P49326 533 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 MFAP3P55082 362 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 LMAN2Q12907 356 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 CEP63Q96MT8 703 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 IPO9Q96P70 1041 aaKnown RBP23.66■■□□□ 1.38
ACTN1-220ENST00000556433 NUSAP1Q9BXS6 441 aaKnown RBP23.66■■□□□ 1.38
ACTN1-220ENST00000556433 PILRBQ9UKJ0 227 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 MAN1B1Q9UKM7 699 aa23.66■■□□□ 1.38
ACTN1-220ENST00000556433 IGHV1OR15-9A0A0B4J2B8 117 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 CD44P16070 742 aaKnown RBP23.65■■□□□ 1.38
ACTN1-220ENST00000556433 PMLP29590 882 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 NOVA1P51513 510 aaKnown RBP23.65■■□□□ 1.38
ACTN1-220ENST00000556433 ADIGQ0VDE8 80 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 GEN1Q17RS7 908 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 UAP1L1Q3KQV9 507 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 CCDC40Q4G0X9 1142 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 BHLHA9Q7RTU4 235 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 ELOA2Q8IYF1 753 aaPredicted RBP23.65■■□□□ 1.38
ACTN1-220ENST00000556433 UBR7Q8N806 425 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 RNF139Q8WU17 664 aa23.65■■□□□ 1.38
ACTN1-220ENST00000556433 PLD4Q96BZ4 506 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms