RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KNOP1Q1ED39 458 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SEL1L2Q5TEA6 688 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 AGBL2Q5U5Z8 902 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ICE2Q659A1 982 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 MMS22LQ6ZRQ5 1243 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC121Q6ZUS5 278 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC91Q7Z6B0 441 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 UBE2Q1Q7Z7E8 422 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 DAAM2Q86T65 1068 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC50Q8IVM0 306 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 FAM186BQ8IYM0 893 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 UBL4BQ8N7F7 174 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 USP38Q8NB14 1042 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 C3orf20Q8ND61 904 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 C1orf131Q8NDD1 294 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SUPT20HQ8NEM7 779 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SH3RF2Q8TEC5 729 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 P3H4Q92791 437 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 FBXW5Q969U6 566 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 MTMR8Q96EF0 704 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 WNK4Q96J92 1243 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ATP6V1G3Q96LB4 118 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 FAM20AQ96MK3 541 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 INPP4AQ96PE3 977 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 AMNQ9BXJ7 453 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 TLR10Q9BXR5 811 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 TRIM55Q9BYV6 548 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ZDHHC5Q9C0B5 715 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 COA1Q9GZY4 146 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ISCUQ9H1K1 167 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PCED1AQ9H1Q7 454 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 GANQ9H2C0 597 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 DHX36Q9H2U1 1008 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 IPPKQ9H8X2 491 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CNOT10Q9H9A5 744 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 JMJD4Q9H9V9 463 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 GDF3Q9NR23 364 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 AIPL1Q9NZN9 384 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 BCCIPQ9P287 314 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 RBPJLQ9UBG7 517 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SEL1LQ9UBV2 794 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 MTRF1LQ9UGC7 380 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 LCMT1Q9UIC8 334 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PLAAQ9Y263 795 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PCDHA1Q9Y5I3 950 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 GREB1LQ9C091 1923 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PFASO15067 1338 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 GRIN2DO15399 1336 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 NCOR1O75376 2440 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 EYSQ5T1H1 3165 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PRUNE2Q8WUY3 3088 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 A0A087X0T9 212 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 IGKV6D-41A0A0C4DH26 115 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 GTPBP10A4D1E9 387 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 E7EVH7 732 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 AGPSO00116 658 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PDXKO00764 312 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PDPK1O15530 556 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RAD51CO43502 376 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 FOXS1O43638 330 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 GGPS1O95749 300 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LTFP02788 710 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 FAM228BP0C875 321 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 UCHL3P15374 230 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CYP11B2P19099 503 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CR2P20023 1033 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RPS12P25398 132 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 KLRC1P26715 233 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RPA1P27694 616 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ATP5DP30049 168 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 HPDP32754 393 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LSP1P33241 339 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PSMC2P35998 433 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 HSPA9P38646 679 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PRKCIP41743 596 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CARSP49589 748 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 MNAT1P51948 309 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RHBDL3P58872 404 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LACTBP83111 547 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ICA1Q05084 483 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PABPC4Q13310 644 aaKnown RBP eCLIP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 FOXE3Q13461 319 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ALCAMQ13740 583 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 DHX34Q14147 1143 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PTGISQ16647 500 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SLC35G1Q2M3R5 365 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 QRICH1Q2TAL8 776 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ASTE1Q2TB18 679 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LRIT3Q3SXY7 679 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 KRT71Q3SY84 523 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PRR16Q569H4 304 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 TTMPQ5BVD1 217 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SPDYCQ5MJ68 293 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 BTBD8Q5XKL5 378 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 DENND2CQ68D51 928 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 KCTD16Q68DU8 428 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ALKBH5Q6P6C2 394 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 TMEM179Q6ZVK1 233 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms