RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SPEM1Q8N4L4 309 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 DDX1Q92499 740 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 EZH1Q92800 747 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 PHOX2BQ99453 314 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 FBXO4Q9UKT5 387 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 AGO1Q9UL18 857 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 NAALADL1Q9UQQ1 740 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 HBS1LQ9Y450 684 aaKnown RBP15.87■□□□□ 0.13
ACTN1-217ENST00000556203 MUC6Q6W4X9 2439 aa15.87■□□□□ 0.13
ACTN1-217ENST00000556203 MIA3Q5JRA6 1907 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 NEDD8-MDP1E9PL57 170 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 TEX33O43247 280 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 RNF40O75150 1001 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 ERBB2P04626 1255 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 FYNP06241 537 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 EIF2DP41214 584 aaKnown RBP15.86■□□□□ 0.13
ACTN1-217ENST00000556203 STAT1P42224 750 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 CXCL12P48061 93 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 HARS2P49590 506 aaKnown RBP15.86■□□□□ 0.13
ACTN1-217ENST00000556203 SATB1Q01826 763 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 PTPN20Q4JDL3 420 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 TSSK4Q6SA08 328 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 MAMSTRQ6ZN01 415 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 ETFBKMTQ8IXQ9 262 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 NAT16Q8N8M0 369 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 TMEM35BQ8NCS4 154 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 EPS8L1Q8TE68 723 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 DQX1Q8TE96 717 aaKnown RBP15.86■□□□□ 0.13
ACTN1-217ENST00000556203 IPO4Q8TEX9 1081 aaKnown RBP15.86■□□□□ 0.13
ACTN1-217ENST00000556203 PNKPQ96T60 521 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 TRIM62Q9BVG3 475 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 BBS2Q9BXC9 721 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 SYNCQ9H7C4 482 aa15.86■□□□□ 0.13
ACTN1-217ENST00000556203 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
ACTN1-217ENST00000556203 FAM170AA1A519 330 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-217ENST00000556203 CAPN9O14815 690 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 APODP05090 189 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 MMEP08473 750 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 TYRP14679 529 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 SNX16P57768 344 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 TPM4P67936 248 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 KDSRQ06136 332 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 MESP2Q0VG99 397 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 TAF5Q15542 800 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 OR6B2Q6IFH4 312 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 PKN3Q6P5Z2 889 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 FAM183BPQ6ZVS7 135 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 BEND5Q7L4P6 421 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 SLC20A1Q8WUM9 679 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 BHMTQ93088 406 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
ACTN1-217ENST00000556203 POPDC2Q9HBU9 364 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 ARHGEF4Q9NR80 690 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 C2orf42Q9NWW7 574 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 MARK1Q9P0L2 795 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 WDR35Q9P2L0 1181 aa15.85■□□□□ 0.13
ACTN1-217ENST00000556203 NOCTQ9UK39 431 aaKnown RBP15.85■□□□□ 0.13
ACTN1-217ENST00000556203 K7EQS6 105 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 TULP3O75386 442 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 KAT7O95251 611 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 LSM8O95777 96 aaKnown RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 CAVIN2O95810 425 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 SERPINC1P01008 464 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 CDH5P33151 784 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 CHKAP35790 457 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 SEC13P55735 322 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 YWHAZP63104 245 aaKnown RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 PPP2R5DQ14738 602 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 ZNF528Q3MIS6 628 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 SYPL2Q5VXT5 272 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 TAC4Q86UU9 113 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 SFTPA1Q8IWL2 248 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 RPLP0P6Q8NHW5 317 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 ADAM32Q8TC27 787 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 NAP1L5Q96NT1 182 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 SERPINB11Q96P15 392 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 XPO6Q96QU8 1125 aaKnown RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 DNAJC17Q9NVM6 304 aaKnown RBP15.84■□□□□ 0.13
ACTN1-217ENST00000556203 PLK2Q9NYY3 685 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 DEC1Q9P2X7 70 aa15.84■□□□□ 0.13
ACTN1-217ENST00000556203 A0A1B0GTH6 734 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 ANTXRLA6NF34 631 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 CACNG3O60359 315 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 HSF2BPO75031 334 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 ATG13O75143 517 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 GRAP2O75791 330 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 IGLV3-27P01718 113 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 NBL1P41271 181 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 GRIA2P42262 883 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 TBX4P57082 545 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 CDR2Q01850 454 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 EFHC1Q5JVL4 640 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 NAA35Q5VZE5 725 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 NUGGCQ68CJ6 796 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 OLFML1Q6UWY5 402 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.12
ACTN1-217ENST00000556203 ZNF677Q86XU0 584 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms