RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DENND4CQ5VZ89 1909 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ANAPC1Q9H1A4 1944 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 NCK2O43639 380 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ENDOD1O94919 500 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 F11P03951 625 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 RHOP08100 348 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 TFE3P19532 575 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 POU3F3P20264 500 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 MIPP30301 263 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 GJC1P36383 396 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 DNA2P51530 1060 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 EPHA5P54756 1037 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 HDAC4P56524 1084 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ARHGAP15Q53QZ3 475 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ODF2Q5BJF6 829 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 LRRC38Q5VT99 294 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 KLHDC10Q6PID8 442 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 POLNQ7Z5Q5 900 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 CPNE8Q86YQ8 564 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 CD101Q93033 1021 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 HES6Q96HZ4 224 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 TLR10Q9BXR5 811 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 LRRC3Q9BY71 257 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ATXN3LQ9H3M9 355 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 CCSER2Q9H7U1 834 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 MARCH2Q9P0N8 246 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 RASAL2Q9UJF2 1139 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 NUDT5Q9UKK9 219 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 USP18Q9UMW8 372 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-208ENST00000555905 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 MTCH2Q9Y6C9 303 aa11.49□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF197O14709 1029 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TADA3O75528 432 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 PAPLNO95428 1278 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 IGLV3-25P01717 112 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 SLC2A3P11169 496 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 HOXB8P17481 243 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 PFKLP17858 780 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 RWDD2BP57060 319 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TAS2R40P59535 323 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 PITX1P78337 314 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 SLC25A11Q02978 314 aaKnown RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 NNTQ13423 1086 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ADAM15Q13444 863 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ARL13BQ3SXY8 428 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 BOLA3Q53S33 107 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 RARS2Q5T160 578 aaKnown RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 OTUD1Q5VV17 481 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ANKRD54Q6NXT1 300 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 GAREM2Q75VX8 874 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 BNIPLQ7Z465 357 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 GRASPQ7Z6J2 395 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TMEM150AQ86TG1 271 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 C12orf76Q8N812 135 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF707Q96C28 371 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 FAM161BQ96MY7 647 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 WDCPQ9H6R7 721 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 ZWILCHQ9H900 591 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TRPC7Q9HCX4 862 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
TMEM260-208ENST00000555905 SFMBT1Q9UHJ3 866 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TLR6Q9Y2C9 796 aa11.48□□□□□ -0.57
TMEM260-208ENST00000555905 TRAV19A0A0A6YYK7 116 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 KCNK3O14649 394 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 MDM4O15151 490 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 LINC01565O15544 149 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 IRAK2O43187 625 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 MSI1O43347 362 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 COCHO43405 550 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 GLP2RO95838 553 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TBX18O95935 607 aa11.47□□□□□ -0.57
TMEM260-208ENST00000555905 OAS1P00973 400 aaKnown RBP11.47□□□□□ -0.57
TMEM260-208ENST00000555905 TCF4P15884 667 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms