RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 CHKAP35790 457 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 MFAP3P55082 362 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 GJB7Q6PEY0 223 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 TMEM92Q6UXU6 159 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 TRMT11Q7Z4G4 463 aaKnown RBP19.26■□□□□ 0.67
NEDD1-208ENST00000555806 IRF2BP1Q8IU81 584 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 FAM114A1Q8IWE2 563 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 TPSD1Q9BZJ3 242 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 THAP9Q9H5L6 903 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 ABCC13Q9NSE7 274 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 SFMBT1Q9UHJ3 866 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 AGO1Q9UL18 857 aaKnown RBP19.26■□□□□ 0.67
NEDD1-208ENST00000555806 EML5Q05BV3 1969 aa19.26■□□□□ 0.67
NEDD1-208ENST00000555806 LRP3O75074 770 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 LETM1O95202 739 aaPredicted RBP19.25■□□□□ 0.67
NEDD1-208ENST00000555806 CHRM1P11229 460 aaPredicted RBP19.25■□□□□ 0.67
NEDD1-208ENST00000555806 SLC9A1P19634 815 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 USP8P40818 1118 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 DGKGP49619 791 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 LMNB2Q03252 620 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 ARHGAP44Q17R89 818 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 EXOC3L4Q17RC7 722 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 CLEC17AQ6ZS10 378 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 SCML4Q8N228 414 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 GOLGA1Q92805 767 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 RMDN1Q96DB5 314 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 HSFY1Q96LI6 401 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 FAM81BQ96LP2 452 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 GBP4Q96PP9 640 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 POLMQ9NP87 494 aaPredicted RBP19.25■□□□□ 0.67
NEDD1-208ENST00000555806 ST7Q9NRC1 585 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 LMBRD1Q9NUN5 540 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 BCCIPQ9P287 314 aaKnown RBP eCLIP19.25■□□□□ 0.67
NEDD1-208ENST00000555806 APEX2Q9UBZ4 518 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 CNTN6Q9UQ52 1028 aa19.25■□□□□ 0.67
NEDD1-208ENST00000555806 HBS1LQ9Y450 684 aaKnown RBP19.25■□□□□ 0.67
NEDD1-208ENST00000555806 SPTBN4Q9H254 2564 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 DCLK1O15075 740 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 THAP12O43422 761 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 MED7O43513 233 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 ADAM23O75077 832 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 FBXO21O94952 628 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 CYBBP04839 570 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 HNRNPLP14866 589 aaKnown RBP eCLIP19.24■□□□□ 0.67
NEDD1-208ENST00000555806 TGM1P22735 817 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 GNA15P30679 374 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 GBP1P32455 592 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 HARS2P49590 506 aaKnown RBP19.24■□□□□ 0.67
NEDD1-208ENST00000555806 APBA1Q02410 837 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 MAN2A1Q16706 1144 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 USP39Q53GS9 565 aaKnown RBP19.24■□□□□ 0.67
NEDD1-208ENST00000555806 HSP90AA4PQ58FG1 418 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 TOGARAM2Q6ZUX3 1019 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 MDGA1Q8NFP4 955 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 KCNV2Q8TDN2 545 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 CLEC4CQ8WTT0 213 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 IRGQQ8WZA9 623 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 MIS12Q9H081 205 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 SEMA4GQ9NTN9 838 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 INVSQ9Y283 1065 aa19.24■□□□□ 0.67
NEDD1-208ENST00000555806 TCRBV21S2A2A0A5A6 115 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 GTPBP10A4D1E9 387 aaKnown RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 MSI1O43347 362 aaKnown RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 GABBR2O75899 941 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 LTFP02788 710 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 PRKCSHP14314 528 aaPredicted RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 ERCC5P28715 1186 aaPredicted RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 WASP42768 502 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 TRIP4Q15650 581 aaPredicted RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 ELF2Q15723 593 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 RSPO4Q2I0M5 234 aaPredicted RBP19.23■□□□□ 0.67
NEDD1-208ENST00000555806 PLK5Q496M5 336 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 FYB2Q5VWT5 728 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 EGFLAMQ63HQ2 1017 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 DENND1BQ6P3S1 775 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 RASSF3Q86WH2 238 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 CPXM2Q8N436 756 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 HMGB4Q8WW32 186 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 LOXL4Q96JB6 756 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 ARRDC1-AS1Q9H2J1 176 aa19.23■□□□□ 0.67
NEDD1-208ENST00000555806 PRR5-ARHGAP8B1AHC4 643 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 PRRT4C9JH25 899 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
NEDD1-208ENST00000555806 EPN2O95208 641 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 PENKP01210 267 aaPredicted RBP19.22■□□□□ 0.67
NEDD1-208ENST00000555806 HOXB2P14652 356 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 PON1P27169 355 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 NTSR1P30989 418 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 GPD2P43304 727 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 ARHGAP8P85298 464 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 CSRP2Q16527 193 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 SDE2Q6IQ49 451 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 CHPFQ8IZ52 775 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 PGBD3Q8N328 593 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 DDI1Q8WTU0 396 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 ZNF606Q8WXB4 792 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 P2RY11Q96G91 374 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 ZC3H10Q96K80 434 aaKnown RBP19.22■□□□□ 0.67
NEDD1-208ENST00000555806 ACP6Q9NPH0 428 aa19.22■□□□□ 0.67
NEDD1-208ENST00000555806 STARD13Q9Y3M8 1113 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms