RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 CEBPBP17676 345 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 MAN1A1P33908 653 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 RDXP35241 583 aaKnown RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 PCK1P35558 622 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 SULT1E1P49888 294 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 ATP11AP98196 1134 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 OGDHQ02218 1023 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 RING1Q06587 406 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TAC4Q86UU9 113 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 REXO1L1PQ8IX06 675 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 NPAS3Q8IXF0 933 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 CCAR2Q8N163 923 aaKnown RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 KIAA1958Q8N8K9 716 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TPCN2Q8NHX9 752 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TBCBQ99426 244 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TRIM7Q9C029 511 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 TDP1Q9NUW8 608 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHMT2-221ENST00000555773 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 RASAL2Q9UJF2 1139 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 SALL4Q9UJQ4 1053 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 ARHGAP26Q9UNA1 814 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 MYH10P35580 1976 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SLC12A8A0AV02 714 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 MACROD2A1Z1Q3 448 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 IRAK2O43187 625 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 BUB1O43683 1085 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 TCF3P15923 654 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 CCR1P32246 355 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 CXCR3P49682 368 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 TBX4P57082 545 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 MESDQ14696 234 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 PPP2R5DQ14738 602 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 C15orf59Q2T9L4 293 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 BRMS1LQ5PSV4 323 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 STXBP5Q5T5C0 1151 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 C11orf63Q6NUN7 778 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ARID3BQ8IVW6 561 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ZSCAN18Q8TBC5 510 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 FAM172AQ8WUF8 416 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ATRIPQ8WXE1 791 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ING5Q8WYH8 240 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SMARCD2Q92925 531 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 RNF34Q969K3 372 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 PLD4Q96BZ4 506 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ACSF2Q96CM8 615 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SLC39A13Q96H72 371 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ZSWIM3Q96MP5 696 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SLC22A12Q96S37 553 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 DCLK3Q9C098 648 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 WDCPQ9H6R7 721 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
SHMT2-221ENST00000555773 OBP2AQ9NY56 170 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 TRIM10Q9UDY6 481 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 CDH22Q9UJ99 828 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 ATG2AQ2TAZ0 1938 aa12.98□□□□□ -0.33
SHMT2-221ENST00000555773 MDM4O15151 490 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 BUB1BO60566 1050 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 LAMP2P13473 410 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 TFE3P19532 575 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 HARS2P49590 506 aaKnown RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 AIF1P55008 147 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 HDAC4P56524 1084 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 NME3Q13232 169 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 SMAD2Q15796 467 aaKnown RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 HADHQ16836 314 aaKnown RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 AAK1Q2M2I8 961 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 ACBD5Q5T8D3 534 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-221ENST00000555773 SLFN11Q7Z7L1 901 aa12.97□□□□□ -0.33
SHMT2-221ENST00000555773 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms