RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PXNP49023 591 aaPredicted RBP21.44■■□□□ 1.02
VTI1B-205ENST00000555543 TYRO3Q06418 890 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 C2orf27AQ580R0 203 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 KLHDC7AQ5VTJ3 777 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 MSANTD2Q6P1R3 559 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 DENND1CQ8IV53 801 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 SCUBE3Q8IX30 993 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 BHMTQ93088 406 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 PLD4Q96BZ4 506 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 HHIPQ96QV1 700 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 LSM14BQ9BX40 385 aaKnown RBP21.44■■□□□ 1.02
VTI1B-205ENST00000555543 SLC4A5Q9BY07 1137 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 EPC1Q9H2F5 836 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 TJP2Q9UDY2 1190 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.43■■□□□ 1.02
VTI1B-205ENST00000555543 E5RJQ4 531 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 CACNG3O60359 315 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 FYNP06241 537 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 HOXA6P31267 233 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 GRIA2P42262 883 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 MYL5Q02045 173 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 SRSF5Q13243 272 aaKnown RBP21.43■■□□□ 1.02
VTI1B-205ENST00000555543 RAPGEF1Q13905 1077 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 TRIP4Q15650 581 aaPredicted RBP21.43■■□□□ 1.02
VTI1B-205ENST00000555543 SYT13Q7L8C5 426 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 SLC47A2Q86VL8 602 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 PASD1Q8IV76 773 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 FAM71AQ8IYT1 594 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 STK32AQ8WU08 396 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 ACDQ96AP0 544 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 NAA15Q9BXJ9 866 aaKnown RBP21.43■■□□□ 1.02
VTI1B-205ENST00000555543 DCLK3Q9C098 648 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 ZDHHC4Q9NPG8 344 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 PLK2Q9NYY3 685 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 DEC1Q9P2X7 70 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 SLC8A2Q9UPR5 921 aa21.43■■□□□ 1.02
VTI1B-205ENST00000555543 A0A0A0MRY4 1105 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 PAPSS1O43252 624 aaPredicted RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 KIR2DL1P43626 348 aaPredicted RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 KLK7P49862 253 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 PDCLQ13371 301 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 DMC1Q14565 340 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 DRAP1Q14919 205 aaPredicted RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 NCAPHQ15003 741 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 EMC10Q5UCC4 262 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 LONP2Q86WA8 852 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 WDTC1Q8N5D0 677 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 TERB1Q8NA31 727 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 HSD3B7Q9H2F3 369 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 DNAJC17Q9NVM6 304 aaKnown RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 SMG5Q9UPR3 1016 aaKnown RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 ZNF510Q9Y2H8 683 aa21.42■■□□□ 1.02
VTI1B-205ENST00000555543 HBS1LQ9Y450 684 aaKnown RBP21.42■■□□□ 1.02
VTI1B-205ENST00000555543 PTPRZ1P23471 2315 aaPredicted RBP21.41■■□□□ 1.02
VTI1B-205ENST00000555543 HRO43593 1189 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 UCHL3P15374 230 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 TIE1P35590 1138 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 ACADSBP45954 432 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 PTK2Q05397 1052 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 SMYD5Q6GMV2 418 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 TMEM110Q86TL2 294 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 WDR5BQ86VZ2 330 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 FAM217AQ8IXS0 508 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 CCDC33Q8N5R6 958 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 ALLCQ8N6M5 410 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 PIWIL1Q96J94 861 aaKnown RBP21.41■■□□□ 1.02
VTI1B-205ENST00000555543 GANQ9H2C0 597 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 WDR35Q9P2L0 1181 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 PCDHGC3Q9UN70 934 aa21.41■■□□□ 1.02
VTI1B-205ENST00000555543 PENKP01210 267 aaPredicted RBP21.4■■□□□ 1.02
VTI1B-205ENST00000555543 MRPS21P82921 87 aaKnown RBP21.4■■□□□ 1.02
VTI1B-205ENST00000555543 FYB2Q5VWT5 728 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 GRAMD4Q6IC98 578 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 TOGARAM2Q6ZUX3 1019 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 AOPEPQ8N6M6 819 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 IL17RCQ8NAC3 791 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 C1orf131Q8NDD1 294 aaKnown RBP21.4■■□□□ 1.02
VTI1B-205ENST00000555543 CCDC26Q8TAB7 109 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 GOLGA1Q92805 767 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 FAM149B1Q96BN6 582 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 CPXM1Q96SM3 734 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 PLCB1Q9NQ66 1216 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 HCN2Q9UL51 889 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 MMP17Q9ULZ9 603 aa21.4■■□□□ 1.02
VTI1B-205ENST00000555543 TBC1D3BA6NDS4 549 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 EPHB6O15197 1021 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 SART1O43290 800 aaKnown RBP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 KLF8O95600 359 aaPredicted RBP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 IGLV3-27P01718 113 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 NCAM1P13591 858 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 HNRNPLP14866 589 aaKnown RBP eCLIP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 ZNF18P17022 549 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 CHKAP35790 457 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 TNFRSF4P43489 277 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 COPB1P53618 953 aaKnown RBP21.39■■□□□ 1.01
VTI1B-205ENST00000555543 LPAL2Q16609 132 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 C10orf76Q5T2E6 689 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 CPXM2Q8N436 756 aa21.39■■□□□ 1.01
VTI1B-205ENST00000555543 DQX1Q8TE96 717 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms