RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KLKB1P03952 638 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 CYBBP04839 570 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
VRK1-204ENST00000555351 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
VRK1-204ENST00000555351 PXNP49023 591 aaPredicted RBP12.39□□□□□ -0.43
VRK1-204ENST00000555351 MFAP3P55082 362 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 SEC13P55735 322 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 DAOAP59103 153 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 KDSRQ06136 332 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 ADIGQ0VDE8 80 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 EFEMP1Q12805 493 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 PLK5Q496M5 336 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 SPDYCQ5MJ68 293 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 MSANTD2Q6P1R3 559 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 FAM114A1Q8IWE2 563 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 TXNDC5Q8NBS9 432 aaKnown RBP12.39□□□□□ -0.43
VRK1-204ENST00000555351 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 MED15Q96RN5 788 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 THAP9Q9H5L6 903 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 SEMA4GQ9NTN9 838 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 NUDT5Q9UKK9 219 aa12.39□□□□□ -0.43
VRK1-204ENST00000555351 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 E7ENQ6 273 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 SGK1O00141 431 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 MED7O43513 233 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 ADAM23O75077 832 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 CISD3P0C7P0 127 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 ZNF806P0C7X5 589 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 HNRNPLP14866 589 aaKnown RBP eCLIP12.38□□□□□ -0.43
VRK1-204ENST00000555351 NTSR1P30989 418 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 HOXC13P31276 330 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 TIE1P35590 1138 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 ACADSBP45954 432 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 HARS2P49590 506 aaKnown RBP12.38□□□□□ -0.43
VRK1-204ENST00000555351 DGKGP49619 791 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 RING1Q06587 406 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 LPAL2Q16609 132 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 SDE2Q6IQ49 451 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 PMF1Q6P1K2 205 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 TRIM65Q6PJ69 517 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 PRR23CQ6ZRP0 262 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 RRAGAQ7L523 313 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 KBTBD6Q86V97 674 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 CCDC33Q8N5R6 958 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
VRK1-204ENST00000555351 NETO1Q8TDF5 533 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 KAT5Q92993 513 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 AZIN2Q96A70 460 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 RTKNQ9BST9 563 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 DUSP15Q9H1R2 295 aaPredicted RBP12.38□□□□□ -0.43
VRK1-204ENST00000555351 UBE2TQ9NPD8 197 aaPredicted RBP12.38□□□□□ -0.43
VRK1-204ENST00000555351 APEX2Q9UBZ4 518 aa12.38□□□□□ -0.43
VRK1-204ENST00000555351 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
VRK1-204ENST00000555351 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 SLC12A8A0AV02 714 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 M0QYV0 167 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 IGLV3-27P01718 113 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 DPP6P42658 865 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 GPD2P43304 727 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 LIMK1P53667 647 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 NNTQ13423 1086 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 EIF4HQ15056 248 aaKnown RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 FMNL3Q8IVF7 1028 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 UNC45BQ8IWX7 931 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 ZNF557Q8N988 423 aaPredicted RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 GOLGA1Q92805 767 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 GABRG3Q99928 467 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 VPS45Q9NRW7 570 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 CDV3Q9UKY7 258 aaKnown RBP12.37□□□□□ -0.43
VRK1-204ENST00000555351 ATG2BQ96BY7 2078 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 CACNA1AO00555 2505 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 SPAG17Q6Q759 2223 aa12.37□□□□□ -0.43
VRK1-204ENST00000555351 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms