RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 AWAT2Q6E213 333 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 MRPL10Q7Z7H8 261 aaKnown RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 MPP5Q8N3R9 675 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 TMEM171Q8WVE6 324 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 RAPGEF4Q8WZA2 1011 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 TRIM63Q969Q1 353 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 PPP2R3CQ969Q6 453 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 GCC1Q96CN9 775 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 ZC3H10Q96K80 434 aaKnown RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 NUP62CLQ9H1M0 184 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 ZMAT3Q9HA38 289 aaKnown RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 RABGAP1Q9Y3P9 1069 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 CES2O00748 559 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 KPNA5O15131 536 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 NCK2O43639 380 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 FGBP02675 491 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 EN2P19622 333 aaPredicted RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 AGFG1P52594 562 aaKnown RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 POLGP54098 1239 aaPredicted RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 BCAT1P54687 386 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 SWSAP1Q6NVH7 229 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 CUL5Q93034 780 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 TBC1D20Q96BZ9 403 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 ASIC5Q9NY37 505 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 AFG3L2Q9Y4W6 797 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 LRP12Q9Y561 859 aa6.09□□□□□ -1.43
VRK1-203ENST00000555067 LRRFIP2Q9Y608 721 aaKnown RBP6.09□□□□□ -1.43
VRK1-203ENST00000555067 A0A087WV62 115 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 A0A1B0GVC2 190 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 FCHO1O14526 889 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 PMPCBO75439 489 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 RNF8O76064 485 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 A1BGP04217 495 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 KITP10721 976 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 PRKAR1BP31321 381 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 COPB2P35606 906 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 CACNB3P54284 484 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 EIF5P55010 431 aaKnown RBP6.08□□□□□ -1.44
VRK1-203ENST00000555067 PPFIA1Q13136 1202 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 CNN3Q15417 329 aaKnown RBP6.08□□□□□ -1.44
VRK1-203ENST00000555067 PTCHD4Q6ZW05 846 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 NANOGP1Q8N7R0 232 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 LRTOMTQ8WZ04 291 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 COQ8BQ96D53 544 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 CCDC17Q96LX7 622 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 PPM1MQ96MI6 270 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 NT5C1BQ96P26 610 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 EFHD1Q9BUP0 239 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 ZNF518BQ9C0D4 1074 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 CERS4Q9HA82 394 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 SMURF2Q9HAU4 748 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 GBA2Q9HCG7 927 aaPredicted RBP6.08□□□□□ -1.44
VRK1-203ENST00000555067 SNX15Q9NRS6 342 aa6.08□□□□□ -1.44
VRK1-203ENST00000555067 CAPN8A6NHC0 703 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 RHPN2P1A8MT19 583 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 RRM1P23921 792 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 EPHA3P29320 983 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 MTHFSP49914 203 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 CASP5P51878 434 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 PSG6Q00889 435 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 G3BP1Q13283 466 aaKnown RBP eCLIP6.07□□□□□ -1.44
VRK1-203ENST00000555067 INSCQ1MX18 579 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 CCDC38Q502W7 563 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 FAM209BQ5JX69 171 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 DCAF12L1Q5VU92 463 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 IZUMO3Q5VZ72 239 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 C1orf122Q6ZSJ8 110 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 NAXEQ8NCW5 288 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 ZNF398Q8TD17 642 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 SNRNP27Q8WVK2 155 aaKnown RBP6.07□□□□□ -1.44
VRK1-203ENST00000555067 SUCLG2Q96I99 432 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 PPP1R9BQ96SB3 815 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 A1CFQ9NQ94 594 aaKnown RBP6.07□□□□□ -1.44
VRK1-203ENST00000555067 XPNPEP3Q9NQH7 507 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 MTMR4Q9NYA4 1195 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 ASAP1Q9ULH1 1129 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 TPCN1Q9ULQ1 816 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 USP22Q9UPT9 525 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 DRG1Q9Y295 367 aaKnown RBP6.07□□□□□ -1.44
VRK1-203ENST00000555067 CDY1Q9Y6F8 540 aa6.07□□□□□ -1.44
VRK1-203ENST00000555067 FIBPO43427 364 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 MGEA5O60502 916 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 MT-CO3P00414 261 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 TKTP29401 623 aaKnown RBP6.06□□□□□ -1.44
VRK1-203ENST00000555067 RXRGP48443 463 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 GHRHRQ02643 423 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 LMAN2Q12907 356 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 ZNF260Q3ZCT1 412 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 SHC4Q6S5L8 630 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 C16orf54Q6UWD8 224 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 CYP26C1Q6V0L0 522 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 C16orf52Q8NHV5 167 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 PHKBQ93100 1093 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 SPSB4Q96A44 273 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 VN1R3Q9BXE9 311 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 TRIM36Q9NQ86 728 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 PI4KBQ9UBF8 816 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms