RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 LRRC42Q9Y546 428 aa4.02□□□□□ -1.77
KTN1-217ENST00000554831 CITO14578 2027 aa4.02□□□□□ -1.77
KTN1-217ENST00000554831 NUP188Q5SRE5 1749 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 USP54Q70EL1 1684 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 A0A096LPK6 155 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 NEMP1O14524 444 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TRAFD1O14545 582 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 GRIN3BO60391 1043 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 RARBP10826 455 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 MLNP12872 115 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 LCP1P13796 627 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PMLP29590 882 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SLC6A3Q01959 620 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 NME3Q13232 169 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 GRM1Q13255 1194 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ORC1Q13415 861 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ADRM1Q16186 407 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 C15orf59Q2T9L4 293 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 UNC93AQ86WB7 457 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SCUBE3Q8IX30 993 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 RNF168Q8IYW5 571 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 PLD5Q8N7P1 536 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 GLIS1Q8NBF1 620 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 COLGALT1Q8NBJ5 622 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 APPL2Q8NEU8 664 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 CALML6Q8TD86 181 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PTPRN2Q92932 1015 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SLC10A4Q96EP9 437 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 NRBF2Q96F24 287 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ACO2Q99798 780 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 SNRNP25Q9BV90 132 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 NIFKQ9BYG3 293 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 AP5M1Q9H0R1 490 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PRDM12Q9H4Q4 367 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ZNF408Q9H9D4 720 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 DDIT4Q9NX09 232 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 IL1RAPL1Q9NZN1 696 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 RABGEF1Q9UJ41 708 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 CPSF3Q9UKF6 684 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 C10orf71Q711Q0 1435 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 IRS2Q9Y4H2 1338 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 A0A0A0MRY4 1105 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 KDM4FA0A1W2PPD8 638 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 RRN3P2A6NIE6 340 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 M0QYT0 321 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 HDAC3O15379 428 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TBX10O75333 385 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TM7SF2O76062 418 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TMEM63AO94886 807 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TAF6P49848 677 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 NUDT2P50583 147 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PRKAA2P54646 552 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 LBRQ14739 615 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 SIX1Q15475 284 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 SMAD1Q15797 465 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 GOLGA7BQ2TAP0 167 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 FBXO47Q5MNV8 452 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TMCO4Q5TGY1 634 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 DPY19L2P1Q6NXN4 242 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ZFP1Q6P2D0 407 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 LINC00523Q86TU6 105 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ERO1BQ86YB8 467 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 BANPQ8N9N5 519 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 RBM15BQ8NDT2 890 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 ZC3H15Q8WU90 426 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 ZNF516Q92618 1163 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SPATA13Q96N96 652 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PPP1R2P1Q96PQ5 205 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 VAT1Q99536 393 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 GPR88Q9GZN0 384 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 MTFR1LQ9H019 292 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 FAM124BQ9H5Z6 455 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 C20orf96Q9NUD7 363 aaPredicted RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 ETNK2Q9NVF9 386 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ARL8BQ9NVJ2 186 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ITGA11Q9UKX5 1188 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 POLIQ9UNA4 740 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ADAMTS7Q9UKP4 1686 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SEC16AO15027 2179 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 LRP6O75581 1613 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 MYO5AQ9Y4I1 1855 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 SMIM31A0A1B0GVY4 71 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 HACD1B0YJ81 288 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 PEX11AO75192 247 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 CSDE1O75534 798 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 SNUPNO95149 360 aaKnown RBP4.01□□□□□ -1.77
KTN1-217ENST00000554831 JCHAINP01591 159 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 BPGMP07738 259 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 SERPINA6P08185 405 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ME2P23368 584 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 ARL2P36404 184 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 HSPA13P48723 471 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TGFB2P61812 414 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 JAG1P78504 1218 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 TAF12Q16514 161 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 FAM83EQ2M2I3 478 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 GALNTL6Q49A17 601 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 NOTUMQ6P988 496 aa4.01□□□□□ -1.77
KTN1-217ENST00000554831 LCLAT1Q6UWP7 414 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms