RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 QPCTQ16769 361 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 LRRC38Q5VT99 294 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 CDCA2Q69YH5 1023 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 ELMSAN1Q6PJG2 1045 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 RGS9BPQ6ZS82 235 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 DEPTORQ8TB45 409 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 PARD3BQ8TEW8 1205 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 SMG7Q92540 1137 aaKnown RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 ZBTB9Q96C00 473 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 ZNF707Q96C28 371 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 MAGEB18Q96M61 343 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 FDXACB1Q9BRP7 624 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 INO80BQ9C086 356 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 MINDY3Q9H8M7 445 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 SSU72Q9NP77 194 aaKnown RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 NKIRAS1Q9NYS0 192 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 DPP7Q9UHL4 492 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 MCM8Q9UJA3 840 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 TBX20Q9UMR3 447 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 NOTCH4Q99466 2003 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 DMXL2Q8TDJ6 3036 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ANKRD63C9JTQ0 380 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 FOXD2O60548 495 aaPredicted RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 CSDE1O75534 798 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 RFPL2O75678 378 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 SHBGP04278 402 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 RARAP10276 462 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 TDGF1P13385 188 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 TSHRP16473 764 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 PTPN7P35236 360 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 RPS9P46781 194 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 GCLMP48507 274 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 SLC11A1P49279 550 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 AP3M2P53677 418 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 NLRP11P59045 1033 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 CLDN10P78369 228 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ZNF211Q13398 564 aaPredicted RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 LPAL2Q16609 132 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 C1orf220Q5T0J3 134 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 TTC27Q6P3X3 843 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 SLC39A4Q6P5W5 647 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 ARHGEF19Q8IW93 802 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 KATNAL2Q8IYT4 538 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 LRRC34Q8IZ02 419 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 PPM1KQ8N3J5 372 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 CELF5Q8N6W0 485 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 EXD1Q8NHP7 514 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 SLC20A1Q8WUM9 679 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 KRT35Q92764 455 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 FGF14Q92915 247 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ARHGEF2Q92974 986 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 RBM41Q96IZ5 413 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 CFAP57Q96MR6 1250 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 RAB3IPQ96QF0 476 aaPredicted RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 RPP25Q9BUL9 199 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 ADAMTS10Q9H324 1103 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 CDC42EP4Q9H3Q1 356 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 RXFP1Q9HBX9 757 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 CHST12Q9NRB3 414 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 MRPL17Q9NRX2 175 aaKnown RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 TBC1D13Q9NVG8 400 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 TAS2R14Q9NYV8 317 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ASIC3Q9UHC3 531 aa11.61□□□□□ -0.55
SRP54-205ENST00000554803 ZFP37Q9Y6Q3 630 aaPredicted RBP11.61□□□□□ -0.55
SRP54-205ENST00000554803 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 TLDC2A0PJX2 215 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 E7ENQ6 273 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 NCAM2O15394 837 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 PROSCO94903 275 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 ADH1AP07327 375 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 SKIP12755 728 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 CD72P21854 359 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 FGFR4P22455 802 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 CCND1P24385 295 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 TBXAS1P24557 533 aaPredicted RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 RASSF2P50749 326 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 NRLP54845 237 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 ELF3P78545 371 aaPredicted RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 IL9RQ01113 521 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 MBTD1Q05BQ5 628 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 GALNTL6Q49A17 601 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 IL31Q6EBC2 164 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 GPD1LQ8N335 351 aa11.6□□□□□ -0.55
SRP54-205ENST00000554803 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
SRP54-205ENST00000554803 ST13P5Q8NFI4 369 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms