RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 CAPN8A6NHC0 703 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CHADO15335 359 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CD3EAPO15446 510 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ITGAVP06756 1048 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TCN1P20061 433 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 IFNA8P32881 189 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 HOXD12P35452 270 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SLC25A3Q00325 362 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 MMRN1Q13201 1228 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TP53BP2Q13625 1128 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ASTE1Q2TB18 679 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 GRTP1Q5TC63 336 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 LRRC8DQ7L1W4 858 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 C12orf56Q8IXR9 622 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PM20D2Q8IYS1 436 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CNTD1Q8N815 330 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 GSTCDQ8NEC7 633 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SLC5A5Q92911 643 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SEC31BQ9NQW1 1179 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SCAF8Q9UPN6 1271 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CEP170BQ9Y4F5 1589 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ZC3H4Q9UPT8 1303 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 FAM237BA0A1B0GVD1 139 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 MAGEB16A2A368 324 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PSMD12O00232 456 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 FBP2O00757 339 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 UBDO15205 165 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 DCXO43602 365 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ITIH1P19827 911 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 GPD2P43304 727 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 GABRB2P47870 512 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PEX3P56589 373 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 RPS6P62753 249 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 FAM83EQ2M2I3 478 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TBC1D25Q3MII6 688 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ANGEL2Q5VTE6 544 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 OR52E8Q6IFG1 317 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 DENND5AQ6IQ26 1287 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TTC7BQ86TV6 843 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SLC22A9Q8IVM8 553 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PGAM4Q8N0Y7 254 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 POU5F2Q8N7G0 328 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 C19orf18Q8NEA5 215 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ENKURQ8TC29 256 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 GATA6Q92908 595 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 NSMCE2Q96MF7 247 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 NSMCE3Q96MG7 304 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 NMUR2Q9GZQ4 415 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TLE6Q9H808 572 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 TRIM45Q9H8W5 580 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 COG4Q9H9E3 785 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 JMJD4Q9H9V9 463 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SENP2Q9HC62 589 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ASAP1Q9ULH1 1129 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ZBTB1Q9Y2K1 713 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ANKRD26Q9UPS8 1709 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ZNF804BA4D1E1 1349 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 RPTORQ8N122 1335 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 MROH2AA6NES4 1674 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 FAM172BPA6NC97 362 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 E9PBE3 544 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 MRASO14807 208 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SNX2O60749 519 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 AKR1B1P15121 316 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ALOX12P18054 663 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SLC5A3P53794 718 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SPIRE1Q08AE8 756 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CAPRIN1Q14444 709 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 USP10Q14694 798 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 CERKLQ49MI3 558 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 OR8H2Q8N162 312 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ACTRT2Q8TDY3 377 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 SGF29Q96ES7 293 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 KAZALD1Q96I82 304 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 REXO4Q9GZR2 422 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 LRRC40Q9H9A6 602 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ZNF556Q9HAH1 456 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ZDHHC7Q9NXF8 308 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ING3Q9NXR8 418 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 DDX43Q9NXZ2 648 aaKnown RBP6.59□□□□□ -1.35
PCNX1-207ENST00000554691 PKD2L1Q9P0L9 805 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ANAPC2Q9UJX6 822 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 C3orf18Q9UK00 162 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 METP08581 1390 aa6.59□□□□□ -1.35
PCNX1-207ENST00000554691 ILVBLA1L0T0 632 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 USP17L3A6NCW0 530 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 USP17L4A6NCW7 530 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PRR23D1E9PI22 279 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SNAPC5O75971 98 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DDHD2O94830 711 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PSAPP07602 524 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 RBP1P09455 135 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 C6orf222P0C671 652 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms