RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 F8W810 466 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ELF3P78545 371 aaPredicted RBP14.33□□□□□ -0.12
VTI1B-204ENST00000554659 HPCAP84074 193 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 PKN2Q16513 984 aaKnown RBP14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ZFP1Q6P2D0 407 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 PRMT9Q6P2P2 845 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 OMA1Q96E52 524 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ZFRQ96KR1 1074 aaKnown RBP14.33□□□□□ -0.12
VTI1B-204ENST00000554659 NMRK1Q9NWW6 199 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 CTNNAL1Q9UBT7 734 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 PGAM1P18669 254 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 RGS2P41220 211 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 CPT1AP50416 773 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 GALNTL6Q49A17 601 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ERMARDQ5T6L9 678 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 FAM131BQ86XD5 332 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ADGRF2Q8IZF7 708 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 RPRD1AQ96P16 312 aaPredicted RBP14.33□□□□□ -0.12
VTI1B-204ENST00000554659 TMEM237Q96Q45 408 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 IRF1P10914 325 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 SLC11A2P49281 568 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 PRIM2P49643 509 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
VTI1B-204ENST00000554659 NAB1Q13506 487 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ARMCX4Q5H9R4 360 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 COQ7Q99807 217 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 SPASTQ9UBP0 616 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 KBTBD13C9JR72 458 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 AGKQ53H12 422 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ASZ1Q8WWH4 475 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 TMEM79Q9BSE2 394 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 GPRC5DQ9NZD1 345 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 SH3BP1Q9Y3L3 701 aa14.33□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SNUPNO95149 360 aaKnown RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 RARRES1P49788 294 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CLCN3P51790 818 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CYP51A1Q16850 503 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 VPS33AQ96AX1 596 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 POLLQ9UGP5 575 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 AK9Q5TCS8 1911 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 BTNL10A8MVZ5 291 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TRIM13O60858 407 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SLITRK3O94933 977 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TNFAIP8O95379 198 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TPBGLP0DKB5 382 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 FASP25445 335 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 OR1G1P47890 313 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CSHL1Q14406 222 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TBCELQ5QJ74 424 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 OTOAQ7RTW8 1153 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 KATNAL2Q8IYT4 538 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 OR8H2Q8N162 312 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 TBC1D13Q9NVG8 400 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 PRG3Q9Y2Y8 225 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 C4BPBP20851 252 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SSTR1P30872 391 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CENPAP49450 140 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CDK7P50613 346 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 RAD23AP54725 363 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ITGB3BPQ13352 177 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF177Q13360 481 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 PDCD2LQ9BRP1 358 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SNTNA6NMZ2 147 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 JCHAINP01591 159 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 NR2C2P49116 596 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SPANXN3Q5MJ09 141 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 SYTL5Q8TDW5 730 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CKAP2Q8WWK9 683 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 CPNE1Q99829 537 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 NRDE2Q9H7Z3 1164 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 KLK14Q9P0G3 267 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 STARD13Q9Y3M8 1113 aa14.32□□□□□ -0.12
VTI1B-204ENST00000554659 PRRG1O14668 218 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 TRDMT1O14717 391 aaKnown RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 CRTAMO95727 393 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 VIL1P09327 827 aaKnown RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 SLC12A3P55017 1021 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 NCALDP61601 193 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 MFSD7Q6UXD7 560 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 MYO1HQ8N1T3 1032 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ABI2Q9NYB9 513 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ANKRD6Q9Y2G4 727 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 F5H5T6 163 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms