RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 GLULP15104 373 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF28P17035 718 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 TGM1P22735 817 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 KIF5BP33176 963 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 GJA4P35212 333 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 MAGEA9P43362 315 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 SESN3P58005 492 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 NLRP11P59045 1033 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CDC42EP1Q00587 391 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CSTF1Q05048 431 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CATSPEREQ5SY80 951 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 SWSAP1Q6NVH7 229 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ESRP1Q6NXG1 681 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 GLB1LQ6UWU2 654 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 PASD1Q8IV76 773 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 RAVER1Q8IY67 606 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZBTB44Q8NCP5 570 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CTCFLQ8NI51 663 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 HDAC7Q8WUI4 952 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 SCYL1Q96KG9 808 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 MYADMQ96S97 322 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 MAP7D2Q96T17 732 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 NELL2Q99435 816 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZMAT4Q9H898 229 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ACSS2Q9NR19 701 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 MRPL17Q9NRX2 175 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 DIAPH3Q9NSV4 1193 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 TRHDEQ9UKU6 1024 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZFP37Q9Y6Q3 630 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 TPRP12270 2363 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 K7ESF4 209 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 DDX3XO00571 662 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 SLC30A4O14863 429 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 NCAM2O15394 837 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF623O75123 536 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 OFD1O75665 1012 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 DARSP14868 501 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 FAHP16930 419 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 SDHAP31040 664 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 MLLT6P55198 1093 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 GPC5P78333 572 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 PHC1P78364 1004 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 UBE2SQ16763 222 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 GPR158Q5T848 1215 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 IGDCC4Q8TDY8 1250 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 NELL1Q92832 810 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 SMAD5Q99717 465 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 YIPF4Q9BSR8 244 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
ATXN3-228ENST00000554592 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 PLEKHA4Q9H4M7 779 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 NRBP2Q9NSY0 501 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 TBC1D13Q9NVG8 400 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 GMEB2Q9UKD1 530 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 CLUHO75153 1309 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 NLRC5Q86WI3 1866 aa5.43□□□□□ -1.54
ATXN3-228ENST00000554592 MYH7P12883 1935 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 KIAA1217Q5T5P2 1943 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 PRAMEF25A6NGN4 478 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
ATXN3-228ENST00000554592 INPPL1O15357 1258 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 MARCH6O60337 910 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 RFPL2O75678 378 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 GLUD1P00367 558 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CYP17A1P05093 508 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 URODP06132 367 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 LSP1P33241 339 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 SLC11A1P49279 550 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 RAB27AP51159 221 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 GPC3P51654 580 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 CLCN3P51790 818 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 AK2P54819 239 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 PFKPQ01813 784 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 DMWDQ09019 674 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 FAPQ12884 760 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 HTR4Q13639 388 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 LRRC32Q14392 662 aa5.42□□□□□ -1.54
ATXN3-228ENST00000554592 ZBTB41Q5SVQ8 909 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms