RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HNRNPA0Q13151 305 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 CBX3Q13185 183 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 EPHA7Q15375 998 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SAFBQ15424 915 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SPECC1Q5M775 1068 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ARMC4Q5T2S8 1044 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 C10orf62Q5T681 223 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 RNF187Q5TA31 235 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 THEMIS2Q5TEJ8 643 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 KIAA1614Q5VZ46 1190 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 MIS18BP1Q6P0N0 1132 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 CWC27Q6UX04 472 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 KANSL1Q7Z3B3 1105 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 GRAMD2AQ8IUY3 354 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ITPRIPQ8IWB1 547 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 LRRC43Q8N309 656 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 RNF10Q8N5U6 811 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 KAT2BQ92831 832 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ARHGEF2Q92974 986 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 GTF3C6Q969F1 213 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 DCPSQ96C86 337 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 MOGAT1Q96PD6 335 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ELF4Q99607 663 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 MYL10Q9BUA6 226 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 HERC2P3Q9BVR0 1158 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 PITHD1Q9GZP4 211 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF768Q9H5H4 540 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 PCDH12Q9NPG4 1184 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 MTMR10Q9NXD2 777 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 GGA3Q9NZ52 723 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 IL1RAPL1Q9NZN1 696 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ATXN10Q9UBB4 475 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 HESX1Q9UBX0 185 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 CNOT7Q9UIV1 285 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 FZD1Q9UP38 647 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 TIMM22Q9Y584 194 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 PCDHB2Q9Y5E7 798 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 HS3ST4Q9Y661 456 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 BZW2Q9Y6E2 419 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ELP1O95163 1332 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 MYPNQ86TC9 1320 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 RPTORQ8N122 1335 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 A0A0A6YYJ9 748 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 B4DLN1 442 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PLD2O14939 933 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 TBX3O15119 743 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 POLR3GO15318 223 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 BIRC5O15392 142 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ORC4O43929 436 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 NMT2O60551 498 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SKAP2O75563 359 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 TCEA3O75764 348 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SCAF4O95104 1147 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 APOL3O95236 402 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ABHD16AO95870 558 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 LMNAP02545 664 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 TUBB4AP04350 444 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ATF7P17544 494 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CSTF2P33240 577 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 IGFALSP35858 605 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SKIV2L2P42285 1042 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 LMAN1P49257 510 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 COPAP53621 1224 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 BPIFB3P59826 476 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 TOMM20Q15388 145 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF174Q15697 407 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ZSCAN23Q3MJ62 389 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SLC9C1Q4G0N8 1177 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PABPC1LQ4VXU2 614 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CFAP157Q5JU67 520 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 BEND6Q5SZJ8 279 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 PIK3R6Q5UE93 754 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 TMCO3Q6UWJ1 677 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CYP26C1Q6V0L0 522 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 LRRC55Q6ZSA7 311 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 RUFY3Q7L099 469 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 RASGRP2Q7LDG7 609 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 NLRP9Q7RTR0 991 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SYCP3Q8IZU3 236 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CD99L2Q8TCZ2 262 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 DIS3LQ8TF46 1054 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SGCDQ92629 289 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SDCCAG3Q96C92 435 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SNF8Q96H20 258 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 SLC39A13Q96H72 371 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 NR1H4Q96RI1 486 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 CCT7Q99832 543 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 POFUT1Q9H488 388 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 VCPKMTQ9H867 229 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 AASDHPPTQ9NRN7 309 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 DDX56Q9NY93 547 aaKnown RBP4.72□□□□□ -1.65
ATXN3-227ENST00000554491 MIS18AQ9NYP9 233 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 AIPL1Q9NZN9 384 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF69Q9UC07 566 aa4.72□□□□□ -1.65
ATXN3-227ENST00000554491 FBXO2Q9UK22 296 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms