RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 TRIP4Q15650 581 aaPredicted RBP21.29■■□□□ 1
FOXA1-203ENST00000553751 ANO4Q32M45 955 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 PHTF2Q8N3S3 785 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 C1orf131Q8NDD1 294 aaKnown RBP21.29■■□□□ 1
FOXA1-203ENST00000553751 GOLGA1Q92805 767 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 CPXM1Q96SM3 734 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 DCLK3Q9C098 648 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 AGO1Q9UL18 857 aaKnown RBP21.29■■□□□ 1
FOXA1-203ENST00000553751 ZNF510Q9Y2H8 683 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 HBS1LQ9Y450 684 aaKnown RBP21.29■■□□□ 1
FOXA1-203ENST00000553751 R4GN57 208 aa21.29■■□□□ 1
FOXA1-203ENST00000553751 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.28■■□□□ 1
FOXA1-203ENST00000553751 CHURC1-FNTBB4DL54 471 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 K7EQS6 105 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 KRT9P35527 623 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 ZNF165P49910 485 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 POLR2FP61218 127 aaKnown RBP21.28■■□□□ 1
FOXA1-203ENST00000553751 KDSRQ06136 332 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 DENND1CQ8IV53 801 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 P2RY11Q96G91 374 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 PIWIL1Q96J94 861 aaKnown RBP21.28■■□□□ 1
FOXA1-203ENST00000553751 PNKPQ96T60 521 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 DAAM1Q9Y4D1 1078 aa21.28■■□□□ 1
FOXA1-203ENST00000553751 SMTNL1A8MU46 457 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 NEDD8-MDP1E9PL57 170 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 K7ESF4 209 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 TULP3O75386 442 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 JAM2P57087 298 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 UBXN1Q04323 297 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 PPP2R5DQ14738 602 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 ZC3H14Q6PJT7 736 aaKnown RBP21.27■■□□□ 1
FOXA1-203ENST00000553751 TPGS1Q6ZTW0 290 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 SFTPA1Q8IWL2 248 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 NAT16Q8N8M0 369 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 DDX1Q92499 740 aaKnown RBP21.27■■□□□ 1
FOXA1-203ENST00000553751 FAM149B1Q96BN6 582 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 PPP1R13BQ96KQ4 1090 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 ERGIC2Q96RQ1 377 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 BBS2Q9BXC9 721 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 USP34Q70CQ2 3546 aa21.27■■□□□ 1
FOXA1-203ENST00000553751 ATG2BQ96BY7 2078 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 A0A0A0MRY4 1105 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 ANTXRLA6NF34 631 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 CACNG3O60359 315 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 ATG13O75143 517 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 KAT7O95251 611 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 CHRM1P11229 460 aaPredicted RBP21.26■□□□□ 0.99
FOXA1-203ENST00000553751 NCAM1P13591 858 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 TYRP14679 529 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
FOXA1-203ENST00000553751 GRIA2P42262 883 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 MRE11P49959 708 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 IQCB1Q15051 598 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 BEND5Q7L4P6 421 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 NOP9Q86U38 636 aaKnown RBP21.26■□□□□ 0.99
FOXA1-203ENST00000553751 FAM217AQ8IXS0 508 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 ZBTB44Q8NCP5 570 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 RPLP0P6Q8NHW5 317 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 EPS8L1Q8TE68 723 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 FAM126AQ9BYI3 521 aaPredicted RBP21.26■□□□□ 0.99
FOXA1-203ENST00000553751 NLRC4Q9NPP4 1024 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 ARHGEF4Q9NR80 690 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 ZSCAN32Q9NX65 697 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 WDR35Q9P2L0 1181 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 NAALADL1Q9UQQ1 740 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 PCDHGA2Q9Y5H1 932 aa21.26■□□□□ 0.99
FOXA1-203ENST00000553751 PENKP01210 267 aaPredicted RBP21.25■□□□□ 0.99
FOXA1-203ENST00000553751 IGLV3-27P01718 113 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 ERBB2P04626 1255 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 APODP05090 189 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 HOXC13P31276 330 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 CDH5P33151 784 aaPredicted RBP21.25■□□□□ 0.99
FOXA1-203ENST00000553751 CHKAP35790 457 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 SEC13P55735 322 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 PTPN20Q4JDL3 420 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 TAF3Q5VWG9 929 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 ALYREFQ86V81 257 aaKnown RBP21.25■□□□□ 0.99
FOXA1-203ENST00000553751 CPXM2Q8N436 756 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 DQX1Q8TE96 717 aaKnown RBP21.25■□□□□ 0.99
FOXA1-203ENST00000553751 USP33Q8TEY7 942 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 NOX5Q96PH1 765 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 TRIM62Q9BVG3 475 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 POLR3BQ9NW08 1133 aaPredicted RBP21.25■□□□□ 0.99
FOXA1-203ENST00000553751 DEC1Q9P2X7 70 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 STOML2Q9UJZ1 356 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 CEP83Q9Y592 693 aa21.25■□□□□ 0.99
FOXA1-203ENST00000553751 TRIM24O15164 1050 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 LILRB5O75023 590 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 GFPT2O94808 682 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 SOX5P35711 763 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 HARS2P49590 506 aaKnown RBP21.24■□□□□ 0.99
FOXA1-203ENST00000553751 YWHAZP63104 245 aaKnown RBP21.24■□□□□ 0.99
FOXA1-203ENST00000553751 DMWDQ09019 674 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 TAF5Q15542 800 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 FYB2Q5VWT5 728 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 SYPL2Q5VXT5 272 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 FAM183BPQ6ZVS7 135 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 NEK11Q8NG66 645 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 CCDC26Q8TAB7 109 aa21.24■□□□□ 0.99
FOXA1-203ENST00000553751 BHMTQ93088 406 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms