RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 VWA3AA6NCI4 1184 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 CLDN5O00501 218 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 LDHAP00338 332 aaKnown RBP14.6□□□□□ -0.07
PRPF39-204ENST00000553605 NTRK1P04629 796 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 ZDHHC11BP0C7U3 371 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 GLDCP23378 1020 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 CD27P26842 260 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 C21orf59P57076 290 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 ZNF720Q7Z2F6 126 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 CACTIN-AS1Q8N1I8 211 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 UCMAQ8WVF2 138 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 TSC1Q92574 1164 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 ANKRD36BP1Q96IX9 119 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 ELF4Q99607 663 aaPredicted RBP14.6□□□□□ -0.07
PRPF39-204ENST00000553605 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
PRPF39-204ENST00000553605 KLF16Q9BXK1 252 aaPredicted RBP14.6□□□□□ -0.07
PRPF39-204ENST00000553605 B3GNT5Q9BYG0 378 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 PDE11AQ9HCR9 933 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 IL17BQ9UHF5 180 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 LSM7Q9UK45 103 aaKnown RBP14.6□□□□□ -0.07
PRPF39-204ENST00000553605 CLCA2Q9UQC9 943 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 SLC27A6Q9Y2P4 619 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 NME7Q9Y5B8 376 aa14.6□□□□□ -0.07
PRPF39-204ENST00000553605 GOLGA8IPA6NC78 632 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 GOLGA8JA6NMD2 632 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 TLR5O60602 858 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 TSPAN3O60637 253 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 FSBPO95073 299 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 ABCB4P21439 1286 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 PCBP4P57723 403 aaKnown RBP14.59□□□□□ -0.07
PRPF39-204ENST00000553605 GOLGA8FQ08AF8 430 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 GOLGA8DPQ0D2H9 430 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 ILKQ13418 452 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 MCM6Q14566 821 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 ZNF234Q14588 700 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 E2F5Q15329 346 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 GEN1Q17RS7 908 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 COLEC12Q5KU26 742 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 PRICKLE2Q7Z3G6 844 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 EID2Q8N6I1 236 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 HVCN1Q96D96 273 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 ACE2Q9BYF1 805 aaPredicted RBP14.59□□□□□ -0.07
PRPF39-204ENST00000553605 IL37Q9NZH6 218 aa14.59□□□□□ -0.07
PRPF39-204ENST00000553605 VILLO15195 856 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 SEMA4FO95754 770 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 TBX18O95935 607 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 EPHX1P07099 455 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 KRT10P13645 584 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 PRKCHP24723 683 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 SLC5A3P53794 718 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 MFAP3P55082 362 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 ANAPC15P60006 121 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 KCNA1Q09470 495 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 SAP25Q8TEE9 199 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 NOC3LQ8WTT2 800 aaKnown RBP14.58□□□□□ -0.08
PRPF39-204ENST00000553605 CALML4Q96GE6 196 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 LHX5Q9H2C1 402 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 DPEP3Q9H4B8 488 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 INTS13Q9NVM9 706 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 COMMD8Q9NX08 183 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 NXF1Q9UBU9 619 aaKnown RBP14.58□□□□□ -0.08
PRPF39-204ENST00000553605 EXOC7Q9UPT5 735 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 UNC79Q9P2D8 2635 aa14.58□□□□□ -0.08
PRPF39-204ENST00000553605 PTPN13Q12923 2485 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 FAM92AA1XBS5 289 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 TACC1O75410 805 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 PPP1R37O75864 691 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 ATP5C1P36542 298 aaKnown RBP14.57□□□□□ -0.08
PRPF39-204ENST00000553605 PGFP49763 221 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 BCAT1P54687 386 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 RACK1P63244 317 aaKnown RBP14.57□□□□□ -0.08
PRPF39-204ENST00000553605 VAC14Q08AM6 782 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 SHBQ15464 509 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
PRPF39-204ENST00000553605 DCBLD1Q8N8Z6 715 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 OR5B17Q8NGF7 314 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 OR2T3Q8NH03 318 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 RFFLQ8WZ73 363 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 P2RY11Q96G91 374 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 HIC2Q96JB3 615 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 ZNF578Q96N58 590 aaPredicted RBP14.57□□□□□ -0.08
PRPF39-204ENST00000553605 ORAI3Q9BRQ5 295 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 ELOVL2Q9NXB9 296 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 DACH1Q9UI36 760 aa14.57□□□□□ -0.08
PRPF39-204ENST00000553605 NUMA1Q14980 2115 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 SLC26A4O43511 780 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 TNNC2P02585 160 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 FAM163BP0C2L3 166 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 GARTP22102 1010 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 INSM1Q01101 510 aaPredicted RBP14.56□□□□□ -0.08
PRPF39-204ENST00000553605 DUOXA2Q1HG44 320 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 SERPINA13PQ6UXR4 307 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 B3GALNT2Q8NCR0 500 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 SNRNP27Q8WVK2 155 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms