RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 HMGB1P1B2RPK0 211 aaPredicted RBP15.75■□□□□ 0.11
SRSF5-203ENST00000553521 H7C0C1 242 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 RIPK2O43353 540 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 CYP2C18P33260 490 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ADRA1BP35368 520 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ATP5OP48047 213 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 GATMP50440 423 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 SCAPQ12770 1279 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TTMPQ5BVD1 217 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 BZW1Q7L1Q6 419 aaKnown RBP15.75■□□□□ 0.11
SRSF5-203ENST00000553521 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 MARCH5Q9NX47 278 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 FBXW11Q9UKB1 542 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TBX21Q9UL17 535 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TBKBP1A7MCY6 615 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TNFRSF10BO14763 440 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 GALTP07902 379 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 RFC2P35250 354 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 CHKAP35790 457 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 MAGEA11P43364 429 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ZNF135P52742 658 aaPredicted RBP15.75■□□□□ 0.11
SRSF5-203ENST00000553521 GDF10P55107 478 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 SLC29A2Q14542 456 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 CTXN3Q4LDR2 81 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 RNASEH2BQ5TBB1 312 aaKnown RBP15.75■□□□□ 0.11
SRSF5-203ENST00000553521 LRRC43Q8N309 656 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 FAM71DQ8N9W8 422 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ANKLE1Q8NAG6 615 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 ATP6V1G3Q96LB4 118 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 WDR6Q9NNW5 1121 aaKnown RBP15.75■□□□□ 0.11
SRSF5-203ENST00000553521 PCDHB5Q9Y5E4 795 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 HEY1Q9Y5J3 304 aa15.75■□□□□ 0.11
SRSF5-203ENST00000553521 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 RPL22P35268 128 aaKnown RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 SMARCB1Q12824 385 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 IKBKEQ14164 716 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 CNKSR3Q6P9H4 555 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 ZC3H18Q86VM9 953 aaKnown RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 HOOK3Q86VS8 718 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 OR2W6PQ8NHA6 318 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 RTP4Q96DX8 246 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 TMEM109Q9BVC6 243 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 GPR62Q9BZJ7 368 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 CDC42EP4Q9H3Q1 356 aaKnown RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 DDIT4Q9NX09 232 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 NLRC5Q86WI3 1866 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 SYNJ2BP-COX16A0A087WUM0 186 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 H7C4K7 107 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 TRIM66O15016 1216 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 OR4Q2P0C623 313 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 SLC5A3P53794 718 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 FUT10Q6P4F1 479 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 FBXO46Q6PJ61 603 aaPredicted RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 CTU1Q7Z7A3 348 aaKnown RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 CEP57Q86XR8 500 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 CDKL3Q8IVW4 592 aaPredicted RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 PPIL6Q8IXY8 311 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 PHACTR1Q9C0D0 580 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 ABCC13Q9NSE7 274 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 ABI2Q9NYB9 513 aaPredicted RBP15.74■□□□□ 0.11
SRSF5-203ENST00000553521 COX16Q9P0S2 106 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 PTPRDP23468 1912 aa15.74■□□□□ 0.11
SRSF5-203ENST00000553521 ACTN2P35609 894 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 CXCR3P49682 368 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 AGBL2Q5U5Z8 902 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 C4orf22Q6V702 233 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 RNF139Q8WU17 664 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 USP29Q9HBJ7 922 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 TMEM39AQ9NV64 488 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 PSD3Q9NYI0 1048 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.73■□□□□ 0.114e-77■■□□□ 13
SRSF5-203ENST00000553521 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
SRSF5-203ENST00000553521 COL4A4P53420 1690 aaPredicted RBP15.73■□□□□ 0.11
SRSF5-203ENST00000553521 TTC4O95801 387 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 GOT1P17174 413 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 HCAR3P49019 387 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 CTCFP49711 727 aaPredicted RBP15.73■□□□□ 0.11
SRSF5-203ENST00000553521 GYS2P54840 703 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 SCN4BQ8IWT1 228 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 EDEM1Q92611 657 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 C10orf88Q9H8K7 445 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 PAK5Q9P286 719 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 TET1Q8NFU7 2136 aa15.73■□□□□ 0.11
SRSF5-203ENST00000553521 AMPD1P23109 780 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 YWHAGP61981 247 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRSF5-203ENST00000553521 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 SCAMP5Q8TAC9 235 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 ARMC5Q96C12 935 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 RBM15Q96T37 977 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRSF5-203ENST00000553521 MAGEB5Q9BZ81 275 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 ROPN1BQ9BZX4 212 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-203ENST00000553521 WDCPQ9H6R7 721 aa15.72■□□□□ 0.11
SRSF5-203ENST00000553521 ROPN1Q9HAT0 212 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-203ENST00000553521 ATP11BQ9Y2G3 1177 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms