RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 LRIT3Q3SXY7 679 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 CXorf57Q6NSI4 855 aaKnown RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 TTC5Q8N0Z6 440 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 SERHLQ9NQF3 203 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 SERTAD4Q9NUC0 356 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 POLKQ9UBT6 870 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 UBR2Q8IWV8 1755 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 EYSQ5T1H1 3165 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 MANSC4A6NHS7 340 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 TUSC2O75896 110 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 FAM163BP0C2L3 166 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ZNF37AP17032 561 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 GPSM2P81274 684 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 NHLH1Q02575 133 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 PPP2R5AQ15172 486 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 HLFQ16534 295 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 NFE2Q16621 373 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ARHGAP40Q5TG30 622 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 NPNTQ6UXI9 565 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 TDHQ8IZJ6 230 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 CDX2Q99626 313 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 TMX4Q9H1E5 349 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-218ENST00000553309 SERTAD3Q9UJW9 196 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 ATP6V0A2Q9Y487 856 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 RTL9Q8NET4 1388 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 HEG1Q9ULI3 1381 aa5.87□□□□□ -1.47
ATXN3-218ENST00000553309 PRUNE2Q8WUY3 3088 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 KIF7Q2M1P5 1343 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 FANCIQ9NVI1 1328 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 PRPF3O43395 683 aaKnown RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 KITP10721 976 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 CCL5P13501 91 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 GPTP24298 496 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 ITPKBP27987 946 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 VIPR2P41587 438 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 SLC11A2P49281 568 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 CCT8P50990 548 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 AGFG1P52594 562 aaKnown RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 LOXL3P58215 753 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 SP2Q02086 613 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 E2F2Q14209 437 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 MINDY4Q4G0A6 757 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 FAM102BQ5T8I3 360 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 SULT6B1Q6IMI4 303 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 CLEC4GQ6UXB4 293 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 OVCH2Q7RTZ1 564 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 ZNF551Q7Z340 670 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 SLC15A4Q8N697 577 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 CLMNQ96JQ2 1002 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 VPS33BQ9H267 617 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 ZMAT3Q9HA38 289 aaKnown RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 TCEAL9Q9UHQ7 104 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 SSX2IPQ9Y2D8 614 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 LAMA2P24043 3122 aaKnown RBP5.86□□□□□ -1.47
ATXN3-218ENST00000553309 MUC3AQ02505 3323 aa5.86□□□□□ -1.47
ATXN3-218ENST00000553309 DUOX1Q9NRD9 1551 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ABCC4O15439 1325 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 hCG_1984214I3L0E3 225 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 BTN3A1O00481 513 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 SLC16A3O15427 465 aaKnown RBP5.85□□□□□ -1.47
ATXN3-218ENST00000553309 TLR5O60602 858 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 EBLN1P0CF75 366 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 CYP2C9P11712 490 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 NDUFB7P17568 137 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ARFIP2P53365 341 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 CTBP1Q13363 440 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ZNF618Q5T7W0 954 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ZNF783Q6ZMS7 281 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 AMIGO2Q86SJ2 522 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 USP38Q8NB14 1042 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 KBTBD7Q8WVZ9 684 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 VOPP1Q96AW1 172 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 SARAFQ96BY9 339 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 RUNDC1Q96C34 613 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 NDRG4Q9ULP0 352 aaKnown RBP5.85□□□□□ -1.47
ATXN3-218ENST00000553309 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
ATXN3-218ENST00000553309 SHOC2Q9UQ13 582 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
ATXN3-218ENST00000553309 ALPK3Q96L96 1907 aa5.85□□□□□ -1.47
ATXN3-218ENST00000553309 MUC6Q6W4X9 2439 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 PHGDHO43175 533 aaKnown RBP5.84□□□□□ -1.47
ATXN3-218ENST00000553309 KCNQ3O43525 872 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 TBC1D4O60343 1298 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 ECE2O60344 883 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 NXPH3O95157 252 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 SCGB1D2O95969 90 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 XRCC6P12956 609 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-218ENST00000553309 JUPP14923 745 aa5.84□□□□□ -1.47
ATXN3-218ENST00000553309 RPS12P25398 132 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms