RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.66■□□□□ 0.26
CDK4-215ENST00000553237 CACNG3O60359 315 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 FGFR1OPO95684 399 aaKnown RBP16.65■□□□□ 0.26
CDK4-215ENST00000553237 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
CDK4-215ENST00000553237 SDHBP21912 280 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 RGS7P49802 495 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 ELF2Q15723 593 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 DENND1CQ8IV53 801 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 SIX6OS1Q8N1H7 587 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 PGBD3Q8N328 593 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 RBBP8NLQ8NC74 664 aaPredicted RBP16.65■□□□□ 0.26
CDK4-215ENST00000553237 HMGB4Q8WW32 186 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 EDEM1Q92611 657 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 DCLK3Q9C098 648 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 POLMQ9NP87 494 aaPredicted RBP16.65■□□□□ 0.26
CDK4-215ENST00000553237 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK4-215ENST00000553237 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
CDK4-215ENST00000553237 ZNF510Q9Y2H8 683 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 EML5Q05BV3 1969 aa16.65■□□□□ 0.26
CDK4-215ENST00000553237 TCRBV21S2A2A0A5A6 115 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 MED19A0JLT2 244 aaPredicted RBP16.64■□□□□ 0.25
CDK4-215ENST00000553237 DCDC2BA2VCK2 349 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 YJEFN3A6XGL0 299 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 PRRT4C9JH25 899 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 E7ENQ6 273 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 GABBR2O75899 941 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 RHOBTB1O94844 696 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 CISD3P0C7P0 127 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 SETSIPP0DME0 302 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 BCKDHBP21953 392 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 DGKGP49619 791 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
CDK4-215ENST00000553237 CNGA2Q16280 664 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 PKDCCQ504Y2 493 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 BSPRYQ5W0U4 402 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 EGFLAMQ63HQ2 1017 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 PMF1Q6P1K2 205 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 RNF139Q8WU17 664 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 KREMEN1Q96MU8 473 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 ACOX2Q99424 681 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 INTS2Q9H0H0 1204 aaKnown RBP16.64■□□□□ 0.25
CDK4-215ENST00000553237 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 SFMBT1Q9UHJ3 866 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK4-215ENST00000553237 SPAG17Q6Q759 2223 aa16.64■□□□□ 0.25
CDK4-215ENST00000553237 RALGAPA1Q6GYQ0 2036 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 MYO18AQ92614 2054 aaKnown RBP16.63■□□□□ 0.25
CDK4-215ENST00000553237 M0QYV0 167 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 ZNF806P0C7X5 589 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 MPLP40238 635 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 CREB5Q02930 508 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 AASDHQ4L235 1098 aaPredicted RBP16.63■□□□□ 0.25
CDK4-215ENST00000553237 TRMT11Q7Z4G4 463 aaKnown RBP16.63■□□□□ 0.25
CDK4-215ENST00000553237 FMNL3Q8IVF7 1028 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 C12orf50Q8NA57 414 aaPredicted RBP16.63■□□□□ 0.25
CDK4-215ENST00000553237 NETO1Q8TDF5 533 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 KCNV2Q8TDN2 545 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 SLC35F5Q8WV83 523 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 MED15Q96RN5 788 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
CDK4-215ENST00000553237 RXFP3Q9NSD7 469 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 STARD13Q9Y3M8 1113 aa16.63■□□□□ 0.25
CDK4-215ENST00000553237 KRT5P13647 590 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 HOXB2P14652 356 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 NTSR1P30989 418 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 CHKAP35790 457 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 DAOAP59103 153 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 GCNT1Q02742 428 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 PLA2G2CQ5R387 149 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 FYB2Q5VWT5 728 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 CHPFQ8IZ52 775 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 ABCA7Q8IZY2 2146 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 FRMD1Q8N878 549 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 OLIG1Q8TAK6 271 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 RTKNQ9BST9 563 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 CNGB3Q9NQW8 809 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
CDK4-215ENST00000553237 PCDHGA5Q9Y5G8 931 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 CACNA1AO00555 2505 aa16.62■□□□□ 0.25
CDK4-215ENST00000553237 DNAH14Q0VDD8 3507 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 MSI1O43347 362 aaKnown RBP16.61■□□□□ 0.25
CDK4-215ENST00000553237 PENKP01210 267 aaPredicted RBP16.61■□□□□ 0.25
CDK4-215ENST00000553237 ZNF132P52740 706 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 STILQ15468 1287 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 TRIP4Q15650 581 aaPredicted RBP16.61■□□□□ 0.25
CDK4-215ENST00000553237 TCEAL6Q6IPX3 200 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 SDE2Q6IQ49 451 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 CLEC4CQ8WTT0 213 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 TCEAL3Q969E4 200 aa16.61■□□□□ 0.25
CDK4-215ENST00000553237 PLD4Q96BZ4 506 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms