RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DLG4P78352 724 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 SIM1P81133 766 aaPredicted RBP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 INCA1Q0VD86 236 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 SLC14A1Q13336 389 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 KIAA1211LQ6NV74 962 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 Q6ZNB5 142 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 CLEC20AQ6ZU45 233 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 LSM7Q9UK45 103 aaKnown RBP12.48□□□□□ -0.41
CKAP4-202ENST00000552828 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
CKAP4-202ENST00000552828 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 MAPK13O15264 365 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 CYP26A1O43174 497 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 GJB3O75712 270 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 PLA2G4AP47712 749 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 ORC1Q13415 861 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 STIM1Q13586 685 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 CAMK4Q16566 473 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 TPGS1Q6ZTW0 290 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 SMYD4Q8IYR2 804 aaPredicted RBP12.47□□□□□ -0.41
CKAP4-202ENST00000552828 MINDY1Q8N5J2 469 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 DEFB119Q8N690 84 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 P2RY11Q96G91 374 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 GTPBP2Q9BX10 602 aaKnown RBP12.47□□□□□ -0.41
CKAP4-202ENST00000552828 FAM124BQ9H5Z6 455 aaPredicted RBP12.47□□□□□ -0.41
CKAP4-202ENST00000552828 NMUR1Q9HB89 426 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 FAM49BQ9NUQ9 324 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 DNMT3LQ9UJW3 386 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 MAN1B1Q9UKM7 699 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 KLK13Q9UKR3 277 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 CYP8B1Q9UNU6 501 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 SLC27A6Q9Y2P4 619 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 NFE2L3Q9Y4A8 694 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
CKAP4-202ENST00000552828 NPC1O15118 1278 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 NR3C1P04150 777 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CAPNS1P04632 268 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 SYPP08247 313 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 RARGP13631 454 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ACO1P21399 889 aaKnown RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 RPL13P26373 211 aaKnown RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 PPP1R2P41236 205 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 PRCPP42785 496 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 DGKGP49619 791 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 PSEN1P49768 467 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 KIF11P52732 1056 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ZNF132P52740 706 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 FAM193AP78312 1265 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ENPP2Q13822 863 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ISM2Q6H9L7 571 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 RAB44Q7Z6P3 723 aaPredicted RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ZCCHC14Q8WYQ9 949 aaKnown RBP12.46□□□□□ -0.41
CKAP4-202ENST00000552828 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 HSPA12BQ96MM6 686 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CYP3A43Q9HB55 503 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 CLIC5Q9NZA1 410 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 SUSD2Q9UGT4 822 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 FRMD4BQ9Y2L6 1034 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 USP3Q9Y6I4 520 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 PCDH15Q96QU1 1955 aa12.46□□□□□ -0.41
CKAP4-202ENST00000552828 BAHCC1Q9P281 2608 aa12.46□□□□□ -0.42
CKAP4-202ENST00000552828 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 BIN1O00499 593 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 STC2O76061 302 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 CLSTN1O94985 981 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 HLA-DRAP01903 254 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 KLKB1P03952 638 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 TRIM21P19474 475 aaKnown RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 ADORA2BP29275 332 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 RDXP35241 583 aaKnown RBP12.45□□□□□ -0.42
CKAP4-202ENST00000552828 ENPEPQ07075 957 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 ADAM9Q13443 819 aa12.45□□□□□ -0.42
CKAP4-202ENST00000552828 MORC3Q14149 939 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms