RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 WNT1P04628 370 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 ITGB2P05107 769 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 IRF1P10914 325 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 LHX1P48742 406 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
SNRPF-204ENST00000552085 FOXK1P85037 733 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
SNRPF-204ENST00000552085 KANSL1Q7Z3B3 1105 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
SNRPF-204ENST00000552085 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
SNRPF-204ENST00000552085 SPTBN1Q01082 2364 aaKnown RBP13.18□□□□□ -0.3
SNRPF-204ENST00000552085 FBN2P35556 2912 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 GABRDO14764 452 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 PPFIA2O75334 1257 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
SNRPF-204ENST00000552085 PRKCHP24723 683 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 RBMS1P29558 406 aaKnown RBP13.18□□□□□ -0.3
SNRPF-204ENST00000552085 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 CLN3Q13286 438 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 USP53Q70EK8 1073 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 HTR3DQ70Z44 454 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 ADGRF2Q8IZF7 708 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 SLC46A1Q96NT5 459 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 PLEKHB1Q9UF11 243 aaPredicted RBP13.18□□□□□ -0.3
SNRPF-204ENST00000552085 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
SNRPF-204ENST00000552085 A0A1W2PPC4 97 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 F8VP50 259 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 H0YCG3 227 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 EFSO43281 561 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 CTDNEP1O95476 244 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 PIGRP01833 764 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 EPHX1P07099 455 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
SNRPF-204ENST00000552085 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 ACOT2P49753 483 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
SNRPF-204ENST00000552085 IFRD2Q12894 506 aaPredicted RBP13.17□□□□□ -0.3
SNRPF-204ENST00000552085 ZNF234Q14588 700 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 E2F5Q15329 346 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
SNRPF-204ENST00000552085 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 KIAA0895LQ68EN5 471 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 NSUN7Q8NE18 718 aaKnown RBP13.17□□□□□ -0.3
SNRPF-204ENST00000552085 PDZD8Q8NEN9 1154 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 EPN3Q9H201 632 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 CRTAC1Q9NQ79 661 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.31e-8■■■■□ 19.7
SNRPF-204ENST00000552085 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 SATB2Q9UPW6 733 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 BSNQ9UPA5 3926 aa13.17□□□□□ -0.3
SNRPF-204ENST00000552085 COL27A1Q8IZC6 1860 aaPredicted RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 OPA1O60313 960 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 GREM1O60565 184 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 YWHAQP27348 245 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 CD38P28907 300 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 RXRGP48443 463 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 DAB2P98082 770 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 ORC2Q13416 577 aaPredicted RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 DIS3L2Q8IYB7 885 aaKnown RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 OXR1Q8N573 874 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 BHMTQ93088 406 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 SLC25A18Q9H1K4 315 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 CCSER2Q9H7U1 834 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 SGK2Q9HBY8 427 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 AASDHPPTQ9NRN7 309 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 PLK2Q9NYY3 685 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 CDH9Q9ULB4 789 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 ATXN7L1Q9ULK2 861 aaPredicted RBP13.16□□□□□ -0.3
SNRPF-204ENST00000552085 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
SNRPF-204ENST00000552085 A0A1W2PR77 199 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 SIGLEC6O43699 453 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 DTNBO60941 627 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 ITGB3P05106 788 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 C7P10643 843 aa13.15□□□□□ -0.3
SNRPF-204ENST00000552085 TUBP50607 506 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms