RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 KLF16Q9BXK1 252 aaPredicted RBP14.1□□□□□ -0.15
ERBB3-215ENST00000550828 SMOC2Q9H3U7 446 aa14.1□□□□□ -0.15
ERBB3-215ENST00000550828 C11orf16Q9NQ32 467 aa14.1□□□□□ -0.15
ERBB3-215ENST00000550828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.1□□□□□ -0.15
ERBB3-215ENST00000550828 SFMBT1Q9UHJ3 866 aa14.1□□□□□ -0.15
ERBB3-215ENST00000550828 CDH7Q9ULB5 785 aa14.1□□□□□ -0.15
ERBB3-215ENST00000550828 CCL26Q9Y258 94 aa14.1□□□□□ -0.15
ERBB3-215ENST00000550828 MIA3Q5JRA6 1907 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 TICRRQ7Z2Z1 1910 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 PRR33A8MZF0 331 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 CCP110O43303 1012 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 RALAP11233 206 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 IL9P15248 144 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 GPD1P21695 349 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-215ENST00000550828 NOS2P35228 1153 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SLC7A9P82251 487 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 EFEMP1Q12805 493 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
ERBB3-215ENST00000550828 ARHGAP15Q53QZ3 475 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 FAM78AQ5JUQ0 283 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 DAB2IPQ5VWQ8 1189 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 PTCRAQ6ISU1 281 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-215ENST00000550828 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 KIAA1328Q86T90 577 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 CMTM8Q8IZV2 173 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SLC35G2Q8TBE7 412 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 ZNF564Q8TBZ8 553 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-215ENST00000550828 USP13Q92995 863 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-215ENST00000550828 ASB16Q96NS5 453 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 GKN1Q9NS71 199 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SMPD4Q9NXE4 827 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 MARCH2Q9P0N8 246 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 RASAL2Q9UJF2 1139 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 PPP2R2CQ9Y2T4 447 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 SCINQ9Y6U3 715 aa14.09□□□□□ -0.15
ERBB3-215ENST00000550828 A0A0A6YYK5 440 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 TRAV19A0A0A6YYK7 116 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 USP27XA6NNY8 438 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 I6L893 689 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 IRAK2O43187 625 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 GREM1O60565 184 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 IGLV3-27P01718 113 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 TCF4P15884 667 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 PDGFRAP16234 1089 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 HDCP19113 662 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 DDX6P26196 483 aaKnown RBP eCLIP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 PTPN9P43378 593 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 SULT1E1P49888 294 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 HDAC4P56524 1084 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 KRT83P78385 493 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ATP11AP98196 1134 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 SLC25A52Q3SY17 297 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 DCUN1D2Q6PH85 259 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 RSRC2Q7L4I2 434 aaKnown RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ALYREFQ86V81 257 aaKnown RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 MIB1Q86YT6 1006 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ZSCAN18Q8TBC5 510 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 RNF139Q8WU17 664 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 CENPIQ92674 756 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 FCRL2Q96LA5 508 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-215ENST00000550828 SLITRK6Q9H5Y7 841 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ANLNQ9NQW6 1124 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 PIGVQ9NUD9 493 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 CTTNBP2NLQ9P2B4 639 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ANAPC7Q9UJX3 599 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 ARHGAP26Q9UNA1 814 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 CPQQ9Y646 472 aa14.08□□□□□ -0.16
ERBB3-215ENST00000550828 SLC12A8A0AV02 714 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 FAM86C2PA6NEL3 165 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 C2CD4DB7Z1M9 353 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 M0QYT0 321 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 CAPN9O14815 690 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 SCAMP3O14828 347 aaKnown RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 ENDOD1O94919 500 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 IPO7O95373 1038 aaKnown RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 CKMP06732 381 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 CCDC175P0C221 793 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 LAMP2P13473 410 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 PFKLP17858 780 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 WEE1P30291 646 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 ATP5C1P36542 298 aaKnown RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 VIPR2P41587 438 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 ZNF143P52747 638 aaPredicted RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 HADHBP55084 474 aaKnown RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 USP4Q13107 963 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 CDO1Q16878 200 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 CYP4V2Q6ZWL3 525 aaPredicted RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 FNIP1Q8TF40 1166 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 GOLGA1Q92805 767 aa14.07□□□□□ -0.16
ERBB3-215ENST00000550828 PGAP3Q96FM1 320 aaPredicted RBP14.07□□□□□ -0.16
ERBB3-215ENST00000550828 SLC39A13Q96H72 371 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms