RNA–Protein interactions for RNA: ENST00000550751.1

CHCHD3P2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 2, humanhuman

BASIC

Gene CHCHD3P2, Length 639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P2-201ENST00000550751 SIX5Q8N196 739 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 SIX6OS1Q8N1H7 587 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 FBXL6Q8N531 539 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 WDTC1Q8N5D0 677 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 KIF18AQ8NI77 898 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 CSGALNACT1Q8TDX6 532 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 SH3RF2Q8TEC5 729 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 DDX1Q92499 740 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 NELL2Q99435 816 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 OSBPL6Q9BZF3 934 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 ULBP1Q9BZM6 244 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 EDEM3Q9BZQ6 932 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 C8orf33Q9H7E9 229 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 ACP6Q9NPH0 428 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 NLRC4Q9NPP4 1024 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 GKN1Q9NS71 199 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 ABCC13Q9NSE7 274 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 OLA1Q9NTK5 396 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 MYO6Q9UM54 1294 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 LUC7L2Q9Y383 392 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 CPQQ9Y646 472 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 EML5Q05BV3 1969 aa8.09□□□□□ -1.11
CHCHD3P2-201ENST00000550751 CHD5Q8TDI0 1954 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 FAM86C2PA6NEL3 165 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 YJEFN3A6XGL0 299 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 E7ENQ6 273 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 LSM8O95777 96 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CCDC175P0C221 793 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 PNMA6AP0CW24 399 aaPredicted RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 LCP1P13796 627 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 TNNT1P13805 278 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 RGS7P49802 495 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 SNX16P57768 344 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 GOLGA8FQ08AF8 430 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 GOLGA8DPQ0D2H9 430 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 PDCLQ13371 301 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 BSPRYQ5W0U4 402 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 BTBD8Q5XKL5 378 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 HTR3DQ70Z44 454 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 BEND5Q7L4P6 421 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 RALGPS2Q86X27 583 aaPredicted RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CCAR2Q8N163 923 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 OSCP1Q8WVF1 389 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 OTUB2Q96DC9 234 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NOX5Q96PH1 765 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 SPAG5Q96R06 1193 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 TRIM62Q9BVG3 475 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 KLF16Q9BXK1 252 aaPredicted RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NACA2Q9H009 215 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NUCKS1Q9H1E3 243 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 MFSD1Q9H3U5 465 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 HEBP1Q9NRV9 189 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 DUS2Q9NX74 493 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 TBC1D14Q9P2M4 693 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CYTH4Q9UIA0 394 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NOCTQ9UK39 431 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CA14Q9ULX7 337 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 MRPS17Q9Y2R5 130 aaKnown RBP8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CEP83Q9Y592 693 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 RALGAPA1Q6GYQ0 2036 aa8.08□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NUP205Q92621 2012 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 KANSL1LA0AUZ9 987 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 SHISA7A6NL88 538 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 PAPSS1O43252 624 aaPredicted RBP8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 GREM1O60565 184 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 MFAP3LO75121 409 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 GFPT2O94808 682 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 TBX18O95935 607 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 ADH1BP00325 375 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 PDGFBP01127 241 aaPredicted RBP8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 LTFP02788 710 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CCDC172P0C7W6 258 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 FERP16591 822 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 AOC1P19801 751 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 PBX1P40424 430 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 GABRB2P47870 512 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 IFNAR2P48551 515 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 COG7P83436 770 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 AMPD2Q01433 879 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CDR2Q01850 454 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 RUNX3Q13761 415 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 EML3Q32P44 896 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CWF19L1Q69YN2 538 aaKnown RBP8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 MSANTD2Q6P1R3 559 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 ZNF852Q6ZMS4 543 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 CACNA2D4Q7Z3S7 1137 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 ZDHHC17Q8IUH5 632 aa8.07□□□□□ -1.12
CHCHD3P2-201ENST00000550751 SUGP1Q8IWZ8 645 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms