RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 BHLHA9Q7RTU4 235 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 RELL1Q8IUW5 271 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 SPPL2BQ8TCT7 592 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 CSPG4P5Q96PW8 444 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 RHOBTB2Q9BYZ6 727 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 COMMD8Q9NX08 183 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 MARCH5Q9NX47 278 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 SAE1Q9UBE0 346 aaPredicted RBP20.26■□□□□ 0.83
KRT18-207ENST00000550600 FBXW11Q9UKB1 542 aa20.26■□□□□ 0.83
KRT18-207ENST00000550600 FNDC1Q4ZHG4 1894 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 BCLAF3A2AJT9 711 aaKnown RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 IFNB1P01574 187 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 PECAM1P16284 738 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 HCAR3P49019 387 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 VPS41P49754 854 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 SLC5A3P53794 718 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 ATXN1P54253 815 aaKnown RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 NME3Q13232 169 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 OTUD1Q5VV17 481 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 PDZD4Q76G19 769 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 HOOK3Q86VS8 718 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 CDKL3Q8IVW4 592 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 NUP93Q8N1F7 819 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 ZCCHC9Q8N567 271 aaKnown RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 FERMT1Q9BQL6 677 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 TTPALQ9BTX7 342 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 GPR62Q9BZJ7 368 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 PHACTR1Q9C0D0 580 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 PIGVQ9NUD9 493 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 ABI2Q9NYB9 513 aaPredicted RBP20.25■□□□□ 0.83
KRT18-207ENST00000550600 SHOC2Q9UQ13 582 aa20.25■□□□□ 0.83
KRT18-207ENST00000550600 HACD1B0YJ81 288 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 H0YGN5 161 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 POLR3GO15318 223 aaPredicted RBP20.24■□□□□ 0.83
KRT18-207ENST00000550600 TP73O15350 636 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 MYZAPP0CAP1 466 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 CXCR3P49682 368 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 GATMP50440 423 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 IFFO1Q0D2I5 559 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 GPR17Q13304 367 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 BTBD8Q5XKL5 378 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 C1orf228Q6PIY5 440 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 SCN4BQ8IWT1 228 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
KRT18-207ENST00000550600 DDIT4Q9NX09 232 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.24■□□□□ 0.83
KRT18-207ENST00000550600 CWC15Q9P013 229 aaKnown RBP20.24■□□□□ 0.83
KRT18-207ENST00000550600 VPS18Q9P253 973 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 RAD54BQ9Y620 910 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 NFS1Q9Y697 457 aa20.24■□□□□ 0.83
KRT18-207ENST00000550600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.23■□□□□ 0.83
KRT18-207ENST00000550600 DGKIO75912 1065 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 YWHAGP61981 247 aaKnown RBP eCLIP20.23■□□□□ 0.83
KRT18-207ENST00000550600 CEP85LQ5SZL2 805 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 MON1AQ86VX9 555 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 RNF139Q8WU17 664 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 RTP4Q96DX8 246 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 CEP295NLQ96MC4 621 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 WDCPQ9H6R7 721 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 CALCOCO1Q9P1Z2 691 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 PAK5Q9P286 719 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 SCML2Q9UQR0 700 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 HEY1Q9Y5J3 304 aa20.23■□□□□ 0.83
KRT18-207ENST00000550600 COL4A4P53420 1690 aaPredicted RBP20.23■□□□□ 0.83
KRT18-207ENST00000550600 GOLGA6CA6NDK9 693 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 HMGB1P1B2RPK0 211 aaPredicted RBP20.22■□□□□ 0.83
KRT18-207ENST00000550600 RTN3O95197 1032 aaPredicted RBP20.22■□□□□ 0.83
KRT18-207ENST00000550600 GOLGA6DP0CG33 693 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 RABGGTBP53611 331 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 CCDC25Q86WR0 208 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 PPIL6Q8IXY8 311 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 ADAM7Q9H2U9 754 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 GOLGA6AQ9NYA3 693 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 SYNJ2BP-COX16A0A087WUM0 186 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 TBC1D4O60343 1298 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 TIMP1P01033 207 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 AMHP03971 560 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 OR4Q2P0C623 313 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 BRMS1LQ5PSV4 323 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 NPNTQ6UXI9 565 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 UNC45BQ8IWX7 931 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 DIS3LQ8TF46 1054 aaKnown RBP20.22■□□□□ 0.83
KRT18-207ENST00000550600 SPATA17Q96L03 361 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 TMEM109Q9BVC6 243 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 SEMA4AQ9H3S1 761 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 COX16Q9P0S2 106 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 VWA8A3KMH1 1905 aa20.22■□□□□ 0.83
KRT18-207ENST00000550600 EEF2KO00418 725 aaKnown RBP20.21■□□□□ 0.83
KRT18-207ENST00000550600 RIPK2O43353 540 aa20.21■□□□□ 0.83
KRT18-207ENST00000550600 CPB1P15086 417 aa20.21■□□□□ 0.83
KRT18-207ENST00000550600 GOT1P17174 413 aa20.21■□□□□ 0.83
KRT18-207ENST00000550600 HTR7P34969 479 aa20.21■□□□□ 0.83
KRT18-207ENST00000550600 RPL22P35268 128 aaKnown RBP20.21■□□□□ 0.83
KRT18-207ENST00000550600 PSEN1P49768 467 aa20.21■□□□□ 0.83
KRT18-207ENST00000550600 PITX1P78337 314 aaPredicted RBP20.21■□□□□ 0.83
KRT18-207ENST00000550600 RNASEH2BQ5TBB1 312 aaKnown RBP20.21■□□□□ 0.83
KRT18-207ENST00000550600 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms