RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 MMRN2Q9H8L6 949 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 TMEM8AQ9HCN3 771 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 NUDT5Q9UKK9 219 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 TNRC6BQ9UPQ9 1833 aaKnown RBP24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 H0Y626 953 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 ARHGAP33O14559 1287 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 STX10O60499 249 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 TRIM16O95361 564 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 SEMA3BQ13214 749 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 KRT39Q6A163 491 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 KIAA1324Q6UXG2 1013 aaKnown RBP24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 RSRC2Q7L4I2 434 aaKnown RBP24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 TAS1R2Q8TE23 839 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 BHMTQ93088 406 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 HSPA12BQ96MM6 686 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 TWNKQ96RR1 684 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 ACOX2Q99424 681 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 NMUR1Q9HB89 426 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 PLK2Q9NYY3 685 aa24.25■■□□□ 1.47
SMARCD1-209ENST00000550477 PRRT4C9JH25 899 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 MDM4O15151 490 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 STC2O76061 302 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 CISD3P0C7P0 127 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 SIM1P81133 766 aaPredicted RBP24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 C1orf220Q5T0J3 134 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 KIAA1211LQ6NV74 962 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 Q6ZNB5 142 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 TOGARAM2Q6ZUX3 1019 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 GUF1Q8N442 669 aaKnown RBP24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 MINDY1Q8N5J2 469 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 KDF1Q8NAX2 398 aaPredicted RBP24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 SPRYD3Q8NCJ5 442 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 ZNF419Q96HQ0 510 aaPredicted RBP24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 UBXN6Q9BZV1 441 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 APOBEC3GQ9HC16 384 aaKnown RBP24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 CAPN10Q9HC96 672 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 CACNA2D2Q9NY47 1150 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 RASAL2Q9UJF2 1139 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 FBXO10Q9UK96 956 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 HCN2Q9UL51 889 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 ZMIZ1Q9ULJ6 1067 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 SLC27A6Q9Y2P4 619 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 USP3Q9Y6I4 520 aa24.24■■□□□ 1.47
SMARCD1-209ENST00000550477 SYNCRIPO60506 623 aaKnown RBP24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 TRIM49P0CI25 452 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 TRIM49CP0CI26 452 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 PPP3CAQ08209 521 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 PLEKHG6Q3KR16 790 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 ZNF394Q53GI3 561 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 PPP1R26Q5T8A7 1209 aaPredicted RBP24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 MRGPRX1Q96LB2 322 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 MAPK8IP1Q9UQF2 711 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 HPSEQ9Y251 543 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 PCDHB9Q9Y5E1 797 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 ATP6V1DQ9Y5K8 247 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 RAD54BQ9Y620 910 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 STON1Q9Y6Q2 735 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 USP24Q9UPU5 2620 aa24.23■■□□□ 1.47
SMARCD1-209ENST00000550477 SPINK2P20155 84 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 CD6P30203 668 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 ARID5AQ03989 594 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 EFEMP1Q12805 493 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 SLC14A1Q13336 389 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 PIP4P1Q86T03 277 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 METTL3Q86U44 580 aaKnown RBP24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 TMEM176AQ96HP8 235 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 PRDM16Q9HAZ2 1276 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 WASF3Q9UPY6 502 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 NEUROG3Q9Y4Z2 214 aa24.22■■□□□ 1.47
SMARCD1-209ENST00000550477 PENKP01210 267 aaPredicted RBP24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 OXTRP30559 389 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 CORO1AP31146 461 aaKnown RBP24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 PKP1Q13835 747 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 SCD5Q86SK9 330 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 FBXL13Q8NEE6 735 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 ERLEC1Q96DZ1 483 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 ZDHHC5Q9C0B5 715 aa24.21■■□□□ 1.47
SMARCD1-209ENST00000550477 LAMA1P25391 3075 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 ADAMTS9Q9P2N4 1935 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 MEI4A8MW99 385 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 WASH3PC4AMC7 463 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 TIMM44O43615 452 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 HMBSP08397 361 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 EPB41P11171 864 aaKnown RBP24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 SLC41A1Q8IVJ1 513 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 SLC2A11Q9BYW1 496 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 SCAND2PQ9GZW5 306 aaPredicted RBP24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 CD248Q9HCU0 757 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 DNAAF2Q9NVR5 837 aaKnown RBP24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 RAB20Q9NX57 234 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 MARCH2Q9P0N8 246 aa24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 THAP10Q9P2Z0 257 aaPredicted RBP24.2■■□□□ 1.46
SMARCD1-209ENST00000550477 SPAARA0A1B0GVQ0 90 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 CETN3O15182 167 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 ACADMP11310 421 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 MXI1P50539 228 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 NDUFA8P51970 172 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 MFAP3P55082 362 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 DPYDQ12882 1025 aa24.19■■□□□ 1.46
SMARCD1-209ENST00000550477 EIF4HQ15056 248 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms