RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 TFAP2BQ92481 460 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 KAT5Q92993 513 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 P2RY11Q96G91 374 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 LRRC4Q9HBW1 653 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 VPS45Q9NRW7 570 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 FBXO10Q9UK96 956 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 INVSQ9Y283 1065 aa20.47■□□□□ 0.87
ATF1-202ENST00000549612 HMBSP08397 361 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 CISD3P0C7P0 127 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 CORO1AP31146 461 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 GBP1P32455 592 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 CHKAP35790 457 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 DGKGP49619 791 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 LIMK1P53667 647 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 UBE2HP62256 183 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 GCNT1Q02742 428 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 C12orf50Q8NA57 414 aaPredicted RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 UBA3Q8TBC4 463 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 NDRG1Q92597 394 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 OLA1Q9NTK5 396 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 AGO1Q9UL18 857 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■■■■ 63.3
ATF1-202ENST00000549612 PCDHB4Q9Y5E5 795 aa20.46■□□□□ 0.87
ATF1-202ENST00000549612 MYO18AQ92614 2054 aaKnown RBP20.46■□□□□ 0.87
ATF1-202ENST00000549612 TCRBV21S2A2A0A5A6 115 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 SLC12A8A0AV02 714 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 BCLAF3A2AJT9 711 aaKnown RBP20.45■□□□□ 0.86
ATF1-202ENST00000549612 DCDC2BA2VCK2 349 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 PRRT4C9JH25 899 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 BCKDHBP21953 392 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 NTSR1P30989 418 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 P2RY2P41231 377 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 KCNH2Q12809 1159 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 AASDHQ4L235 1098 aaPredicted RBP20.45■□□□□ 0.86
ATF1-202ENST00000549612 EGFLAMQ63HQ2 1017 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 TOGARAM2Q6ZUX3 1019 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 SIX6OS1Q8N1H7 587 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 EHBP1Q8NDI1 1231 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 HMGB4Q8WW32 186 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 BHMTQ93088 406 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 PLD4Q96BZ4 506 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 ZSWIM1Q9BR11 485 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 SRRTQ9BXP5 876 aaKnown RBP20.45■□□□□ 0.86
ATF1-202ENST00000549612 CNGB3Q9NQW8 809 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 KIAA1468Q9P260 1216 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 BCCIPQ9P287 314 aaKnown RBP eCLIP20.45■□□□□ 0.86
ATF1-202ENST00000549612 LAMA1P25391 3075 aa20.45■□□□□ 0.86
ATF1-202ENST00000549612 YJEFN3A6XGL0 299 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 E7ENQ6 273 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 RNF225M0QZC1 329 aaPredicted RBP20.44■□□□□ 0.86
ATF1-202ENST00000549612 AFPP02771 609 aaKnown RBP20.44■□□□□ 0.86
ATF1-202ENST00000549612 HOXB2P14652 356 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 ZNF132P52740 706 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 CREB5Q02930 508 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 STILQ15468 1287 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 TRIP4Q15650 581 aaPredicted RBP20.44■□□□□ 0.86
ATF1-202ENST00000549612 CNGA2Q16280 664 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 FYB2Q5VWT5 728 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 BSPRYQ5W0U4 402 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 DENND1CQ8IV53 801 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 ARHGEF19Q8IW93 802 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 FAM217AQ8IXS0 508 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 CPXM2Q8N436 756 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 RBBP8NLQ8NC74 664 aaPredicted RBP20.44■□□□□ 0.86
ATF1-202ENST00000549612 SLC35F5Q8WV83 523 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 SMOC1Q9H4F8 434 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 CD248Q9HCU0 757 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 PLK2Q9NYY3 685 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 SLC27A6Q9Y2P4 619 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
ATF1-202ENST00000549612 ABCA7Q8IZY2 2146 aa20.44■□□□□ 0.86
ATF1-202ENST00000549612 A0A1W2PQF6 199 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 GABBR2O75899 941 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 FGFR1OPO95684 399 aaKnown RBP20.43■□□□□ 0.86
ATF1-202ENST00000549612 DAOAP59103 153 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 MAP7D1Q3KQU3 841 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 RRAGAQ7L523 313 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 RLN3Q8WXF3 142 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 SPACA7Q96KW9 195 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 ACOX2Q99424 681 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 GABRG3Q99928 467 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 INTS2Q9H0H0 1204 aaKnown RBP20.43■□□□□ 0.86
ATF1-202ENST00000549612 RXFP3Q9NSD7 469 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 CNTN6Q9UQ52 1028 aa20.43■□□□□ 0.86
ATF1-202ENST00000549612 HBS1LQ9Y450 684 aaKnown RBP20.43■□□□□ 0.86
ATF1-202ENST00000549612 M0QYV0 167 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 CAVIN2O95810 425 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 GABRG2P18507 467 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 BRD2P25440 801 aaKnown RBP20.42■□□□□ 0.86
ATF1-202ENST00000549612 BYSLQ13895 437 aaKnown RBP20.42■□□□□ 0.86
ATF1-202ENST00000549612 PMF1Q6P1K2 205 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 FMNL3Q8IVF7 1028 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 CHPFQ8IZ52 775 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 RNF139Q8WU17 664 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 IRGQQ8WZA9 623 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 EDEM1Q92611 657 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 KREMEN1Q96MU8 473 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 ABCC13Q9NSE7 274 aa20.42■□□□□ 0.86
ATF1-202ENST00000549612 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms