RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PRKAR1BP31321 381 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 HTR7P34969 479 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 ABCG1P45844 678 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 AVPR1BP47901 424 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 AARSP49588 968 aaKnown RBP eCLIP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 GATMP50440 423 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CCR5P51681 352 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 VAMP2P63027 116 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CXADRP78310 365 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 FPGSQ05932 587 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 TUBB3Q13509 450 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CLCA4Q14CN2 919 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 BEAN1Q3B7T3 259 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CD300EQ496F6 205 aaPredicted RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 RINT1Q6NUQ1 792 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 C1orf122Q6ZSJ8 110 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 ABRAQ8N0Z2 381 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 SUN3Q8TAQ9 357 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM171Q8WVE6 324 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 WDR60Q8WVS4 1066 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 SMG7Q92540 1137 aaKnown RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 SNX19Q92543 992 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 ZBTB45Q96K62 511 aaPredicted RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 ADAM2Q99965 735 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 AMBRA1Q9C0C7 1298 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM74BQ9NUR3 256 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 RIMKLBQ9ULI2 386 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 C19orf53Q9UNZ5 99 aaPredicted RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 CNTN6Q9UQ52 1028 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 SNX14Q9Y5W7 946 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 SCINQ9Y6U3 715 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 GAGE12BA1L429 117 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 PIPSLA2A3N6 862 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 GAGE12HA6NDE8 117 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 A6NLC8 198 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 ZSCAN9O15535 394 aaPredicted RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SNX2O60749 519 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 C1RP00736 705 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 IGLV2-14P01704 120 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 CD4P01730 458 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 HKR1P10072 659 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 ADORA2AP29274 412 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 ELF1P32519 619 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 TUBP50607 506 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 EIF5P55010 431 aaKnown RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 TIRAPP58753 221 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 FOXD4Q12950 439 aaPredicted RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 ACOX1Q15067 660 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SMAD1Q15797 465 aaKnown RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 GEN1Q17RS7 908 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 BTBD16Q32M84 506 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 BBS12Q6ZW61 710 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 RSRC2Q7L4I2 434 aaKnown RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 RRAGAQ7L523 313 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 TTC30AQ86WT1 665 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 PCYOX1LQ8NBM8 494 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 CSGALNACT1Q8TDX6 532 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 WASF1Q92558 559 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 FUBP1Q96AE4 644 aaKnown RBP4.75□□□□□ -1.65
SNRPF-202ENST00000549580 COQ10AQ96MF6 247 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 COG8Q96MW5 612 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 TWNKQ96RR1 684 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SLC26A6Q9BXS9 759 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SLC29A3Q9BZD2 475 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 PI4KBQ9UBF8 816 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SERTAD3Q9UJW9 196 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 NFU1Q9UMS0 254 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 USP22Q9UPT9 525 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 SLC27A6Q9Y2P4 619 aa4.75□□□□□ -1.65
SNRPF-202ENST00000549580 ITIH6Q6UXX5 1313 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 FER1L4A9Z1Z3 1794 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 GXYLT2A0PJZ3 443 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 EFCAB8A8MWE9 144 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 E7EVH7 732 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 PPP6R2O75170 966 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 RBMXL2O75526 392 aaKnown RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 RPP40O75818 363 aaKnown RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 MBD4O95243 580 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 CENPBP07199 599 aaPredicted RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 CNPP09543 421 aaKnown RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 XBP1P17861 261 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 GATA3P23771 443 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 AKT1P31749 480 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 MPLP40238 635 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 LIFRP42702 1097 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 MCM2P49736 904 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 VAV2P52735 878 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 ELLP55199 621 aaPredicted RBP4.74□□□□□ -1.65
SNRPF-202ENST00000549580 GUCY1B3Q02153 619 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 UBE3AQ05086 875 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 CHRNDQ07001 517 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 MTAPQ13126 283 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 TRPC3Q13507 836 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 GPR162Q16538 588 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 ERCC6LQ2NKX8 1250 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 MAP3K21Q5TCX8 1036 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 RINLQ6ZS11 566 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 DTX2Q86UW9 622 aa4.74□□□□□ -1.65
SNRPF-202ENST00000549580 TRABD2AQ86V40 505 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms